HHsearch results for GI: 254781223 and protein with PDBid: 3gos_A
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N- succinyltransferase; 1.80A {Yersinia pestis} PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.21 E-value=1.9e-11 Score=63.38 Aligned_cols=100 Identities=22% Similarity=0.279 Sum_probs=67.2
Q ss_pred CCEEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC--------CCCCCCCCCCC
Q ss_conf 8769889709928839979815457543231122222221001135520221111222110--------11222221101
Q gi|254781223|r 3 DNAVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGG--------NAIVRDTAEVG 74 (110)
Q Consensus 3 ~n~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~--------~~~~~~~~~i~ 74 (110)
+++.+...+.|.+++.+. .++|--+|.+..++-+...+.++..++++.+++++..+.+++ .+.+.+++.|+
T Consensus 109 PgavVR~GayI~~~~vlM-ps~VNiGAyVg~gtMId~~~~vg~~a~IG~~v~i~~g~~igGvlep~~~~~~iied~~~IG 187 (276)
T 3gos_A 109 PPATVRKGAFIARNTVLM-PSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVG 187 (276)
T ss_dssp TTCEEBTTCEECTTCEEC-SEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEEC
T ss_pred CCHHCCCCCEECCCEEEE-CCEECCCCEECCCEEECCCCCCCCEEEECCCCEECCCCEEEEECCCCCCCCCEEECCEEEE
T ss_conf 851211474856983861-4165357687788688136625560288798277698676442167888898870783892
Q ss_pred CCCCCCCCCCCCCCEEECCCEEECCCCEE
Q ss_conf 11111112432201397498499888899
Q gi|254781223|r 75 GDAFVIGFTVISGNARVRGNAVVGGDTVV 103 (110)
Q Consensus 75 ~~~~i~~~~~I~~~~~I~~~~~I~~~~~I 103 (110)
.++.+..++.|+.++.|+.++.+...+.+
T Consensus 188 a~~~v~~gv~v~~~avi~ag~~v~~~t~i 216 (276)
T 3gos_A 188 ARSEVVEGVIVEEGSVISMGVFIGQSTRI 216 (276)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCCE
T ss_pred CCCEEECCEEECCCCEECCCEEEECCCCC
T ss_conf 17677558897137697563377246342