HHsearch results for GI: 254781223 and protein with PDBid: 3kwd_A
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.80 E-value=7.7e-20 Score=98.35 Aligned_cols=107 Identities=19% Similarity=0.286 Sum_probs=85.5
Q ss_pred CCCCEEECCCEEECCCCEECCCCEECCCCCCCC----CCCCCCCCCEEEEEEEEC--------------CCCCCCCCCCC
Q ss_conf 968769889709928839979815457543231----122222221001135520--------------22111122211
Q gi|254781223|r 1 MYDNAVVRDCATVIDDARVSGNASVSRFAQVKS----NAEVSDNTYVRDNAKVGG--------------YAKVSGNASVG 62 (110)
Q Consensus 1 i~~n~~I~~~a~I~~~~~I~~n~~I~~~~~i~~----~~~i~~~~~i~~~~~i~~--------------~~~i~~~~~i~ 62 (110)
|+++++|+|+|.|.+++.||++|.|+|++.|++ ...|++++.+.+++.++. .+.++.++.+.
T Consensus 42 I~~~a~I~~~A~i~g~V~IG~~~~Igp~~~Ir~d~g~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~IG~~v~Ig 121 (213)
T 3kwd_A 42 IAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSIT 121 (213)
T ss_dssp ECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEEC
T ss_pred CCCCCEECCCCEEECCEEECCCCEECCCCEEECCCCCCEEECCCEECCCCCEEECCCCCCEECCCCCCCCCEECCCEEEC
T ss_conf 19998999999995874999999998996893247987698995141678355014544300678864561989980889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCEECCCEE
Q ss_conf 0112222211011111111243220139749849988889969809
Q gi|254781223|r 63 GNAIVRDTAEVGGDAFVIGFTVISGNARVRGNAVVGGDTVVEGDTV 108 (110)
Q Consensus 63 ~~~~~~~~~~i~~~~~i~~~~~I~~~~~I~~~~~I~~~~~I~~~~~ 108 (110)
.++.+.+++.|+++++|+.++.+. ++.|++++.|+.++.+.+..+
T Consensus 122 ~~~~I~~~~~Ig~~~~IG~~s~i~-~~~IG~~~vIg~~~~v~~~~v 166 (213)
T 3kwd_A 122 HMALIHGPAYIGDGCFIGFRSTVF-NARVGAGCVVMMHVLIQDVEI 166 (213)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEEESCEE
T ss_pred CCCCCCCCCEECCCCEECCCCEEE-CCEECCCCEECCCCEECCCEE
T ss_conf 850004651577986890982982-989999999999988998897