HHsearch alignment for GI: 254781225 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=91.93  E-value=0.41  Score=25.13  Aligned_cols=49  Identities=18%  Similarity=0.361  Sum_probs=32.4

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             999888799999999999999997598743379999707886257899999997233
Q gi|254781225|r  471 DLVSGYFESEEVMDYFTRCVGMALLGGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGN  527 (789)
Q Consensus       471 ~~l~~~~~d~e~~~~l~~~~g~~l~g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~  527 (789)
T Consensus       140 ~~l~~~~~~~~~~~fL~~aV~--------~r~NIlIsGgTGSGKTTllnALl~~IP~  188 (343)
T PRK13851        140 EAILRHYDNGDLEAFLHACVV--------GRLTMLLCGPTGSGKTTMSKTLISAIPP  188 (343)
T ss_pred             HHHHHCCCCHHHHHHHHHHHH--------CCCCEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf             787750243779999999997--------6988999888986199999999962896