HHsearch alignment for GI: 254781225 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=92.58 E-value=0.23 Score=26.83 Aligned_cols=158 Identities=13% Similarity=0.218 Sum_probs=80.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCCC--------CC-EEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC-------C
Q ss_conf 99988879999999999999999759874--------33-79999707886257899999997233000344-------2
Q gi|254781225|r 471 DLVSGYFESEEVMDYFTRCVGMALLGGNK--------AQ-RFIHIRGVGGSGKSTLMNLIKYAFGNQYVINA-------E 534 (789)
Q Consensus 471 ~~l~~~~~d~e~~~~l~~~~g~~l~g~~~--------~~-~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~-------~ 534 (789)
T Consensus 3 ~EL~~~vGL~~vK~~i~EiYA~i~i~~kR~~~GLk~~~~~LHMiFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ER 82 (261)
T TIGR02881 3 RELSRLVGLDEVKELIKEIYAWIQINEKRKEEGLKTSKQVLHMIFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVER 82 (261)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 23564048889999999999999998888751011488447877427866843899999999985337567886788762
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCEEEEEEC--CC
Q ss_conf 6764201245555689889973898099993467776013100245415985873210478606871452899973--88
Q gi|254781225|r 535 ASDIMQNRPPEAGKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASFTPFIVP--NK 612 (789)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~~~~~~~~~~~p~~~~~~~~--N~ 612 (789)
T Consensus 83 ADLVGEYIGHTAqkTRe~~kkA~GG-vLFiDEAYSLaRGGEKDF----GKEAIDtLVK~---mEd~~~~lvlILAGY~~E 154 (261)
T TIGR02881 83 ADLVGEYIGHTAQKTREVIKKALGG-VLFIDEAYSLARGGEKDF----GKEAIDTLVKA---MEDQRNELVLILAGYSDE 154 (261)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCC-CHHHHHHHHHHCCCCCCC----CCHHHHHHHHH---HHHCCCCEEEEEECCHHH
T ss_conf 2212232030048999999986388-005577777614888876----62088899998---761569868997087689
Q ss_pred CCCCCCCCCCEEEEEEEEECCCCCCCC
Q ss_conf 634267984166468999658878887
Q gi|254781225|r 613 HLFVRNPDDAWWRRYIVIPFDKPIANR 639 (789)
Q Consensus 613 ~P~~~~~d~~~~rR~~iipF~~~~~~~ 639 (789)
T Consensus 155 M~yFL~~NPGL~SRF---Pi~i~FPdY 178 (261)
T TIGR02881 155 MDYFLSLNPGLRSRF---PISIDFPDY 178 (261)
T ss_pred HHHHHHCCCCCCCCC---CCEEECCCC
T ss_conf 999862077977766---505418899