HHsearch alignment for GI: 254781225 and conserved domain: pfam04735
>pfam04735 Baculo_helicase Baculovirus DNA helicase.
Probab=98.15 E-value=3.5e-06 Score=58.78 Aligned_cols=139 Identities=17% Similarity=0.272 Sum_probs=94.2
Q ss_pred HHHHH-CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCC
Q ss_conf 99997-59874337999970788625789999999723300034426764201245555689889973898099993467
Q gi|254781225|r 490 VGMAL-LGGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEAGKANPSLIRLMGSRIVIISETN 568 (789)
Q Consensus 490 ~g~~l-~g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~~~~~~~la~l~g~r~~~~~E~~ 568 (789)
T Consensus 867 F~ASLaIPtDYEK~clyL~g~PnsGKSSffELLd~iivvh---K~D~~~Y~~~k----ket~emev~k~~SQLYviNE~k 939 (1173)
T pfam04735 867 FCASLAIPTDYEKMCLYLNGKPNCGKSSFFELLDKIILVH---KHDKEKYTLSK----KETDEMEVKKLESQLYVINEAK 939 (1173)
T ss_pred HHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHEEEEE---ECCHHHCCCCC----CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6301168875211799914889997132899862058998---43555326888----8887889998874777888998
Q ss_pred CCCCCCCCEEEEEECC-CEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCC
Q ss_conf 7760131002454159-8587321047860687145289997388634267984166468999658878887
Q gi|254781225|r 569 ENDEINAAKIKQMTGG-DCMTARLNYGNTYSESPASFTPFIVPNKHLFVRNPDDAWWRRYIVIPFDKPIANR 639 (789)
Q Consensus 569 ~~~~~~~~~~K~ltgg-D~i~ar~~~~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~rR~~iipF~~~~~~~ 639 (789)
T Consensus 940 ---~cs~sffK~~ADSTKsdsv~rkY~g~q-kyeaNYK~lIvNNkpL~I~DYDkgv~NRf~ivY~DH~F~e~ 1007 (1173)
T pfam04735 940 ---KCSKSFFKSIADSTKSDSACRKYGGSE-KYEANYKLLIVNNKPLYISDYDKGVRNRFGQIYTDHEFEEN 1007 (1173)
T ss_pred ---HHHHHHHHCCCCCCCHHHHHHCCCHHH-HHHHCCEEEEECCCEEEEECCCHHHHHCEEEEEECCCCCCC
T ss_conf ---852887431333431021132143366-42300528998387037605655544224789723211438