HHsearch results for GI: 254781225 and protein with PDBid: 1ixz_A

>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*

Probab=93.64  E-value=0.16  Score=26.32  Aligned_cols=71  Identities=17%  Similarity=0.180  Sum_probs=41.7

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC---CCCHHHHHHCCCEEEEEECCCC
Q ss_conf             74337999970788625789999999723300034426764201245555---6898899738980999934677
Q gi|254781225|r  498 NKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEAG---KANPSLIRLMGSRIVIISETNE  569 (789)
Q Consensus       498 ~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~~---~~~~~la~l~g~r~~~~~E~~~  569 (789)
                      .+..+-++++|+-|.|||++.+.|.+-+|-.... .+...+..+....+.   ..-++.|+...--++++.|.+.
T Consensus        46 ~~~p~giLl~GppGtGKT~la~aia~e~~~~~~~-i~~~~l~~~~~g~~e~~l~~~f~~a~~~~p~il~iDeid~  119 (254)
T 1ixz_A           46 ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFIT-ASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDA  119 (254)
T ss_dssp             CCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEE-EEHHHHHHSCTTHHHHHHHHHHHHHTTSSSEEEEEETHHH
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE-EEHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf             9988657877787656279999999763997699-8869963534428999999999999976997999977155