HHsearch results for GI: 254781225 and protein with PDBid: 1ro2_A
>1ro2_A Hypothetical protein ORF904; DNA polymerase, primase, replication, polymerization, evolution of nucleic acid polymerizing enzymes; 1.60A {Sulfolobus islandicus} SCOP: d.264.1.2 PDB: 1ro0_A 1rni_A
Probab=99.89 E-value=2e-23 Score=171.90 Aligned_cols=179 Identities=18% Similarity=0.231 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCC--CCCCCCCCCCCHHHHHHH----H-HCCEEEEECCCCCCEEEEEEECCCC
Q ss_conf 67888878999977985977356778787--756545656898999742----0-0788999234779879999646881
Q gi|254781225|r 3 VMQWKEQAKQAIHNGFKLIPLRLGDKRPQ--RLGKWEEQLLSSEKIDKL----P-ACGFGFVCGVGEQPLYAFDIDSKDE 75 (789)
Q Consensus 3 ~~~~~~~~~~~i~~G~~viPi~pg~KrP~--~~~~w~~~~~~~~~i~~~----~-~~giGi~~G~~s~glv~iDiD~~d~ 75 (789)
.++| |.+|+++||+|||+.|++|+|. .|.+|+++.++.++|.+| | ++||||.||. +++|+||||.+++
T Consensus 4 ~l~~---A~~y~~~G~~V~Pl~p~~K~P~~~~W~~~~~~~~t~~ei~~w~~~~p~~~NiGI~tG~--sglvViDiD~~~~ 78 (216)
T 1ro2_A 4 RIRY---AKWMLEHGFNIIPIDPESKKPVLKEWQKYSHEMPSDEEKQRFLKMIEEGYNYAIPGGQ--KGMVIMDFESKEK 78 (216)
T ss_dssp HHHH---HHHHHHTTCCCEEECTTTCSBSSTTGGGGGTSCCCHHHHHHHHHHHHHTCEEEEESSG--GGEEEEEESCHHH
T ss_pred HHHH---HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCC--CCEEEEECCCCCH
T ss_conf 9999---9999988997996689998578678743146899999999999859975559998178--8889997888520
Q ss_pred HHHHH-HHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCC--CCCCCCCCEEEECCCCEEEECCCC------CCCCC
Q ss_conf 25678-9998764189976996788965999950731024454--444576753485268438804776------88887
Q gi|254781225|r 76 KTANT-FKDTFEILHGTPIVRIGQKPKILIPFRMNKEGIKKKK--TTESTQGHLDILGCGQYFVAYNIH------PKTKK 146 (789)
Q Consensus 76 ~~~~~-~~~~~~~l~g~p~~~~g~~~~~~~~yr~~~~~~~~~~--~~~~~~~~iEi~~~G~q~V~~gsh------p~Tg~ 146 (789)
..... +....+.+..+..+++++. +.|++|+.+..+..+.. ......+.+||++.|+|||+|||. +.++.
T Consensus 79 ~~~~~~~~~l~~~~~~T~~v~TpsG-G~HlYf~~~~~p~~~~~~~~~~~g~~~iDir~~ggYVVaPgS~i~h~~~~~~~~ 157 (216)
T 1ro2_A 79 LKAWIGESALEELCRKTLCTNTVHG-GIHIYVLSNDIPPHKINPLFEENGKGIIDLQSYNSYVLGLGSCVNHLHCTTDKC 157 (216)
T ss_dssp HHHHHCHHHHHHHHHHSCEEECTTS-CEEEEEECSCCCSSCCCCSEESSSSEEEEEECTTCEEECTTCEEEGGGCCSTTC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCC-EEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCEEEECCEECCCCCCCCCCC
T ss_conf 6666555666620888669988998-589999778878554365332389844899716988995581035666787777
Q ss_pred CEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 457517765-58722164689999999997620012434543
Q gi|254781225|r 147 EYTWTTPPH-RFKVEDTPLLSEEDVEYLFKFFQEITVPLVKD 187 (789)
Q Consensus 147 ~Y~w~~~~~-~~~~~~~P~i~~~~~~~l~~~~~~~~~~~~~~ 187 (789)
+|+|..... .....+++.+.+..++.++.++..+.+..+..
T Consensus 158 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~ 199 (216)
T 1ro2_A 158 PWKEQNYTTCYTLYNELKEISKVDLKSLLRFLAEKGKRLGIT 199 (216)
T ss_dssp TTTTCSCEEECEESSSCCCCEECCHHHHHHHHHHHHGGGTCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 745787302566654334456104678899998766653763