HHsearch results for GI: 254781225 and protein with PDBid: 3eie_A
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, membrane, nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=97.03 E-value=0.00045 Score=43.34 Aligned_cols=153 Identities=14% Similarity=0.071 Sum_probs=77.5
Q ss_pred HHCCCHHHHHHHHHHHHHHHC------CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC--
Q ss_conf 887999999999999999975------987433799997078862578999999972330003442676420124555--
Q gi|254781225|r 475 GYFESEEVMDYFTRCVGMALL------GGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEA-- 546 (789)
Q Consensus 475 ~~~~d~e~~~~l~~~~g~~l~------g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~-- 546 (789)
+|.|-++..+.+++.+-+-+. +.....+-++|+|+.|+|||++.+.+..-+|-.........+++...+...
T Consensus 19 dI~G~~~~k~~l~e~i~~pl~~~~~~~~~~~~~~giLL~GPpGtGKT~la~aiA~e~~~~~~~i~~~~l~~~~~g~~e~~ 98 (322)
T 3eie_A 19 DVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKL 98 (322)
T ss_dssp GSCSCHHHHHHHHHHTHHHHHCGGGCCTTCCCCCEEEEECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHH
T ss_conf 96399999999999999887598978369999971688797998789999999998589856756899876246299999
Q ss_pred CCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEE--CCCCCCEEEECCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 568988997389809999346777601310024541598587321--047860687145289997388634267984166
Q gi|254781225|r 547 GKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARL--NYGNTYSESPASFTPFIVPNKHLFVRNPDDAWW 624 (789)
Q Consensus 547 ~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~--~~~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~ 624 (789)
-..-+..|+...-.++++.|.+.--. .+-....+.+...... ..............++.+||++ ..-|.++.
T Consensus 99 i~~~f~~a~~~~p~ii~iDeid~l~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~vivI~aTN~~---~~ld~al~ 172 (322)
T 3eie_A 99 VKQLFAMARENKPSIIFIDQVDALTG---TRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIP---WQLDSAIR 172 (322)
T ss_dssp HHHHHHHHHHTSSEEEEEECGGGGSC---C------CCTHHHHHHHHHHHGGGGTSCCCEEEEEEESCG---GGSCHHHH
T ss_pred HHHHHHHHHHCCCCEEEECHHHHHCC---CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH---HHCCHHHH
T ss_conf 99999999864996674120344305---5778888327999999999975113567874899727980---33589998
Q ss_pred EEEE-EEECC
Q ss_conf 4689-99658
Q gi|254781225|r 625 RRYI-VIPFD 633 (789)
Q Consensus 625 rR~~-iipF~ 633 (789)
||+- .|.|.
T Consensus 173 rRfd~~i~i~ 182 (322)
T 3eie_A 173 RRFERRIYIP 182 (322)
T ss_dssp HHCCEEEECC
T ss_pred HHHHEEEEEC
T ss_conf 2503688608