HHsearch results for GI: 254781225 and protein with PDBid: 3eie_A

>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, membrane, nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=97.03  E-value=0.00045  Score=43.34  Aligned_cols=153  Identities=14%  Similarity=0.071  Sum_probs=77.5

Q ss_pred             HHCCCHHHHHHHHHHHHHHHC------CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC--
Q ss_conf             887999999999999999975------987433799997078862578999999972330003442676420124555--
Q gi|254781225|r  475 GYFESEEVMDYFTRCVGMALL------GGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEA--  546 (789)
Q Consensus       475 ~~~~d~e~~~~l~~~~g~~l~------g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~--  546 (789)
                      +|.|-++..+.+++.+-+-+.      +.....+-++|+|+.|+|||++.+.+..-+|-.........+++...+...  
T Consensus        19 dI~G~~~~k~~l~e~i~~pl~~~~~~~~~~~~~~giLL~GPpGtGKT~la~aiA~e~~~~~~~i~~~~l~~~~~g~~e~~   98 (322)
T 3eie_A           19 DVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKL   98 (322)
T ss_dssp             GSCSCHHHHHHHHHHTHHHHHCGGGCCTTCCCCCEEEEECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHHHH
T ss_pred             HHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHH
T ss_conf             96399999999999999887598978369999971688797998789999999998589856756899876246299999


Q ss_pred             CCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEE--CCCCCCEEEECCEEEEEECCCCCCCCCCCCCEE
Q ss_conf             568988997389809999346777601310024541598587321--047860687145289997388634267984166
Q gi|254781225|r  547 GKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARL--NYGNTYSESPASFTPFIVPNKHLFVRNPDDAWW  624 (789)
Q Consensus       547 ~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~--~~~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~  624 (789)
                      -..-+..|+...-.++++.|.+.--.   .+-....+.+......  ..............++.+||++   ..-|.++.
T Consensus        99 i~~~f~~a~~~~p~ii~iDeid~l~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~vivI~aTN~~---~~ld~al~  172 (322)
T 3eie_A           99 VKQLFAMARENKPSIIFIDQVDALTG---TRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIP---WQLDSAIR  172 (322)
T ss_dssp             HHHHHHHHHHTSSEEEEEECGGGGSC---C------CCTHHHHHHHHHHHGGGGTSCCCEEEEEEESCG---GGSCHHHH
T ss_pred             HHHHHHHHHHCCCCEEEECHHHHHCC---CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH---HHCCHHHH
T ss_conf             99999999864996674120344305---5778888327999999999975113567874899727980---33589998


Q ss_pred             EEEE-EEECC
Q ss_conf             4689-99658
Q gi|254781225|r  625 RRYI-VIPFD  633 (789)
Q Consensus       625 rR~~-iipF~  633 (789)
                      ||+- .|.|.
T Consensus       173 rRfd~~i~i~  182 (322)
T 3eie_A          173 RRFERRIYIP  182 (322)
T ss_dssp             HHCCEEEECC
T ss_pred             HHHHEEEEEC
T ss_conf             2503688608