RPSBLAST alignment of GI: 254781225 and protein with PDBid: 1u0j

>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A Length = 267

 Score = 58.8 bits (142), Expect = 5e-09
 Identities = 18/161 (11%), Positives = 36/161 (22%), Gaps = 26/161 (16%)

Query: 485 YFTRCVGMALLGGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPP 544
           Y               +  I + G   +GK+ +   I +       +N            
Sbjct: 88  YAASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVPFYGCVNWTNE-------- 139

Query: 545 EAGKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASF 604
                N      +   ++   E            K + GG  +       ++    P   
Sbjct: 140 -----NFPFNDCVDKMVIWWEEGK-MTAKVVESAKAILGGSKVRVDQKCKSSAQIDP--- 190

Query: 605 TPFIV---------PNKHLFVRNPDDAWWRRYIVIPFDKPI 636
           TP IV          + +            R       + +
Sbjct: 191 TPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFKFELTRRL 231