HHsearch alignment for GI: 255764460 and conserved domain: COG1419
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion].
Probab=96.53 E-value=0.029 Score=33.85 Aligned_cols=102 Identities=24% Similarity=0.291 Sum_probs=66.0
Q ss_pred CCCCCCCCHHHHHHHCCCCCCC-----CCEEEEEECCCCHHHHHHHHHHHHHH--HCCCEEEEEECCCCCCH-------H
Q ss_conf 5501477278999723897268-----80799970687237899999987520--08987999973885566-------8
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPK-----GRIVEIYGPESSGKTTLALHTIAQSQ--KTGGTCAFVDAEHALDS-------I 110 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~-----Gri~ei~G~~~sGKTtlal~~~a~~q--k~g~~~~~iD~E~~~~~-------~ 110 (363)
T Consensus 177 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtD-tYRIGA~EQLk~ 254 (407)
T COG1419 177 YEDLRYFSEKLRKLLL-SLIENLIVEQKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTD-TYRIGAVEQLKT 254 (407)
T ss_pred CCHHHHHHHHHHHHHH-HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC-CCHHHHHHHHHH
T ss_conf 2123217999999887-64411112468579998998875887999999999753257606899714-411528999999
Q ss_pred HHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 8998198833448972584899999999997448976899814333
Q gi|255764460|r 111 YARKLGVDLKNLLISQPDTGEQALEITDMLVRSGAVDIIVIDSVAA 156 (363)
Q Consensus 111 ~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~li~~~~~~liViDSi~a 156 (363)
T Consensus 255 Ya~im~vp~~---vv--~~~~el~~ai~~l---~~~d~ILVDTaGr 292 (407)
T COG1419 255 YADIMGVPLE---VV--YSPKELAEAIEAL---RDCDVILVDTAGR 292 (407)
T ss_pred HHHHHCCCEE---EE--CCHHHHHHHHHHH---HCCCEEEEECCCC
T ss_conf 9998699559---96--3999999999985---3188899968998