HHsearch alignment for GI: 255764460 and conserved domain: COG1484
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=97.53 E-value=0.0011 Score=42.83 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=74.7
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHH
Q ss_conf 72688079997068723789999998752008987999973885566889981988334489725848999999999974
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQALEITDMLVR 142 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~li~ 142 (363)
T Consensus 101 ~~~~~~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~~~-----~el~~~Lk~~~~~------~~~~~~--l~~~l-- 165 (254)
T COG1484 101 FFERGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITA-----PDLLSKLKAAFDE------GRLEEK--LLREL-- 165 (254)
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEH-----HHHHHHHHHHHHC------CCHHHH--HHHHH--
T ss_conf 73258828998999987999999999999983984999885-----9999999998745------526899--99887--
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC-CCCCC
Q ss_conf 48976899814333220265543455530224788876776777764201781899986341145665466512-56553
Q gi|255764460|r 143 SGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFGSPET-TTGGN 221 (363)
Q Consensus 143 ~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p~~-~~GG~ 221 (363)
T Consensus 166 -~~~dlLIiDDlG~~~~~~~-~~--------------~~~~q~I~~r~~~~~~-~~tsN~~~~~~~~~~~~~~~~e~~~d 228 (254)
T COG1484 166 -KKVDLLIIDDIGYEPFSQE-EA--------------DLLFQLISRRYESRSL-IITSNLSFGEWDELFGDDALTEALLD 228 (254)
T ss_pred -HHCCEEEEECCCCCCCCCH-HH--------------HHHHHHHHHHHHHCCC-CEEECCCHHHHHHHCCCCCHHHHHHH
T ss_conf -5289899823677668815-58--------------7999999999973054-20205882788866067511689999
Q ss_pred CCCCCCCEEE
Q ss_conf 1111112489
Q gi|255764460|r 222 ALKFYSSVRL 231 (363)
Q Consensus 222 al~~~aS~rl 231 (363)
T Consensus 229 Ri~~~~~~~~ 238 (254)
T COG1484 229 RILHHSHVIV 238 (254)
T ss_pred HHHHCCCCEE
T ss_conf 9986161037