HHsearch alignment for GI: 255764460 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=97.02 E-value=0.006 Score=38.20 Aligned_cols=89 Identities=24% Similarity=0.326 Sum_probs=56.0
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHH-HH--CCCEEEEEECCCCCCHHHHHHHCC-----------CHHHEEE---
Q ss_conf 972688079997068723789999998752-00--898799997388556688998198-----------8334489---
Q gi|255764460|r 62 GGFPKGRIVEIYGPESSGKTTLALHTIAQS-QK--TGGTCAFVDAEHALDSIYARKLGV-----------DLKNLLI--- 124 (363)
Q Consensus 62 GG~p~Gri~ei~G~~~sGKTtlal~~~a~~-qk--~g~~~~~iD~E~~~~~~~a~~~Gv-----------d~~~l~~--- 124 (363)
T Consensus 141 pg~~yNPL-fIyG~~GlGKTHLl-~AIgn~~~~~~p~~~v~Y~tae~-F~~~~v~al~~~~~~~Fr~~yr~~DvLliDDi 217 (447)
T PRK00149 141 PGKAYNPL-FIYGGVGLGKTHLL-HAIGNYILEKNPNAKVVYVSSEK-FTNDFVKALRNNAMEEFKEKYRSVDVLLIDDI 217 (447)
T ss_pred CCCCCCCE-EEECCCCCCHHHHH-HHHHHHHHHHCCCCEEEEEEHHH-HHHHHHHHHHCCCHHHHHHHHHCCCEEEECHH
T ss_conf 67677855-89779988788999-99999999858997289954999-99999999851869999999972885432148
Q ss_pred ----EECCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf ----72584899999999997448976899814
Q gi|255764460|r 125 ----SQPDTGEQALEITDMLVRSGAVDIIVIDS 153 (363)
Q Consensus 125 ----~~~~~~E~~~~i~~~li~~~~~~liViDS 153 (363)
T Consensus 218 qfl~gk~~tqeeff~~fn~l~~~~kqiv~tsd~ 250 (447)
T PRK00149 218 QFLAGKEKTQEEFFHTFNALHENNKQIVITSDR 250 (447)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 886055779999999999999849968995788