HHsearch alignment for GI: 255764460 and conserved domain: PRK05580
>PRK05580 primosome assembly protein PriA; Validated.
Probab=96.39 E-value=0.082 Score=31.03 Aligned_cols=60 Identities=22% Similarity=0.184 Sum_probs=48.5
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
Q ss_conf 789997238972688079997068723789999998752008987999973885566889981
Q gi|255764460|r 53 LGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKL 115 (363)
Q Consensus 53 ~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~ 115 (363)
T Consensus 175 ~a~~~i~~~---~~~~~~LL~GvTGSGKTevYl~li~~~l~~GkqvLiLvPEI~lt~q~~~rl 234 (699)
T PRK05580 175 AALAAIRAA---GGFSAFLLDGVTGSGKTEVYLQAIAEALAQGKQALVLVPEIALTPQLLARF 234 (699)
T ss_pred HHHHHHHHC---CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
T ss_conf 999999855---888717874789860799999999999973997899917678789999999