HHsearch alignment for GI: 255764460 and conserved domain: PRK05748
>PRK05748 replicative DNA helicase; Provisional.
Probab=99.59 E-value=3.2e-12 Score=96.86 Aligned_cols=223 Identities=15% Similarity=0.177 Sum_probs=137.0
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHH----HHHHHCCC
Q ss_conf 6550147727899972389726880799970687237899999987520-089879999738855668----89981988
Q gi|255764460|r 44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSI----YARKLGVD 118 (363)
Q Consensus 44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~----~a~~~Gvd 118 (363)
T Consensus 182 ~~~Gi~TG~~~LD~~~--~G~~~g~LiviaaRP~mGKTa~alnia~~~a~~~~~~v~~fSlEM~~~~l~~R~la~~s~v~ 259 (448)
T PRK05748 182 DITGIPTGFRDLDKMT--SGLQPNDLIIVAARPSVGKTAFALNIAQNVATKTDKNVAIFSLEMGAESLVMRMLCAEGRID 259 (448)
T ss_pred CCCEEECCHHHHHHHH--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 9761057827899982--79886737999847998768999999999998569808998177888899999999974677
Q ss_pred HHHE------------------------EEEE--C-CCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 3344------------------------8972--5-8489999999999744-897689981433322026554345553
Q gi|255764460|r 119 LKNL------------------------LISQ--P-DTGEQALEITDMLVRS-GAVDIIVIDSVAALTPRAEIEGDMGES 170 (363)
Q Consensus 119 ~~~l------------------------~~~~--~-~~~E~~~~i~~~li~~-~~~~liViDSi~al~p~~Eie~~~~d~ 170 (363)
T Consensus 260 ~~~i~~g~l~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~~~~~~~~vviDYlqli~~~-~~~------ 332 (448)
T PRK05748 260 QQKLRTGQLTDEDWPKLTIAVGSLSDAPIYIDDTPGIKVTEIRARCRRLAQEHGGLGLIVIDYLQLIQGS-GRS------ 332 (448)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCC-CCC------
T ss_conf 7777628999999999999999986598378558988689999999999997599889997168644777-877------
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCC--CCCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf 022478887677677776420178189998634114566546-65125--655311111124897504553445772476
Q gi|255764460|r 171 LPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETT--TGGNALKFYSSVRLDIRRVGSIKDKDSITG 247 (363)
Q Consensus 171 ~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~--~GG~al~~~aS~rl~i~k~~~ik~~~~~iG 247 (363)
T Consensus 333 -~~~r~~ev~~isr~lK~lAkel~ipvi~lsQLnR~~e~R~~krP~lsDLr~SG~IEqdAD~v~~l~R~~~y~~~~~~~~ 411 (448)
T PRK05748 333 -GENRQQEVSEISRSLKALAKELKVPVIALSQLSRGVEQRQDKRPVMSDIRESGSIEQDADIVAFLYRDDYYDEETENKN 411 (448)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCEEEEECCHHHCCCCCCCCC
T ss_conf -6439999999999999999996998899702684322258999875452244530320768989653432388888898
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 799987740577898515899986187423111
Q gi|255764460|r 248 NQTRVKVVKNKMASPFKQVEFDIMYGEGISFFG 280 (363)
Q Consensus 248 ~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~ 280 (363)
T Consensus 412 -~~e~ivaKnR~G~~g---~v~~~f~~~~~rf~ 440 (448)
T PRK05748 412 -TIEIIIGKQRNGPVG---TVRLAFQKEYNKFV 440 (448)
T ss_pred -EEEEEEECCCCCCCC---EEEEEEECCCCCHH
T ss_conf -279999726899860---59999867878720