HHsearch alignment for GI: 255764460 and conserved domain: PRK06315
>PRK06315 type III secretion system ATPase; Provisional.
Probab=97.98 E-value=6.4e-05 Score=50.68 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=78.9
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHHH----CC
Q ss_conf 465501477278999723897268807999706872378999999875200898799997388556-6889981----98
Q gi|255764460|r 43 EGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARKL----GV 117 (363)
Q Consensus 43 ~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~~----Gv 117 (363)
T Consensus 143 ~i~epl~TGIraID~llp---ig~GQR~gIfagsGvGKs~Ll~~i~~~~~~adv~V~~lIGeRgrEv~efie~~~~~~~l 219 (442)
T PRK06315 143 KLRTILSTGVRCIDGMLT---VARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGM 219 (442)
T ss_pred CCCCCCCCCCEEECCCCC---CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 878753368530011277---02377764038999988899999997440389349999551137999999975201452
Q ss_pred CHHHEEEEECCC--------HHHHHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHHHHHH
Q ss_conf 833448972584--------89999999999744897689981433322-0265543455
Q gi|255764460|r 118 DLKNLLISQPDT--------GEQALEITDMLVRSGAVDIIVIDSVAALT-PRAEIEGDMG 168 (363)
Q Consensus 118 d~~~l~~~~~~~--------~E~~~~i~~~li~~~~~~liViDSi~al~-p~~Eie~~~~ 168 (363)
T Consensus 220 ~rsvvV~atsd~p~~~R~~a~~~A~aiAEyFrd~G~~VLl~~DslTR~A~A~REi~l~~g 279 (442)
T PRK06315 220 KRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAG 279 (442)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 133999617999878875558877789999986899489994370288889999997558