HHsearch alignment for GI: 255764460 and conserved domain: PRK06820
>PRK06820 type III secretion system ATPase; Validated.
Probab=97.33 E-value=0.0004 Score=45.64 Aligned_cols=118 Identities=17% Similarity=0.243 Sum_probs=68.4
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEE-ECCCCCC-HHHHHHH-CC-CHH
Q ss_conf 550147727899972389726880799970687237899999987520089879999-7388556-6889981-98-833
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFV-DAEHALD-SIYARKL-GV-DLK 120 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~i-D~E~~~~-~~~a~~~-Gv-d~~ 120 (363)
T Consensus 144 ~~pL~TGIraID~l~p---igrGQR~gIfgg~GvGKT~Ll~~i~~~~~-ad-v~V~~~IGeRgrEv~efie~~~~~~~~~ 218 (445)
T PRK06820 144 EQMLTTGIRAIDGILS---CGEGQRIGIFAAAGVGKSTLLSMLCADSA-AD-VMVLALIGERGREVREFLEQVLTPEARA 218 (445)
T ss_pred CCCCCCCCEEEECCCC---CCCCCCCEEECCCCCCCCHHHHHHHHHCC-CC-EEEEEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf 8511268546625677---44787421106899981223445653067-88-7999987441289999999864237611
Q ss_pred HEE--EEECCC--HHH------HHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHHHHH
Q ss_conf 448--972584--899------99999999744897689981433322-026554345
Q gi|255764460|r 121 NLL--ISQPDT--GEQ------ALEITDMLVRSGAVDIIVIDSVAALT-PRAEIEGDM 167 (363)
Q Consensus 121 ~l~--~~~~~~--~E~------~~~i~~~li~~~~~~liViDSi~al~-p~~Eie~~~ 167 (363)
T Consensus 219 rtvvV~atsd~p~~~R~~a~~~a~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~ 276 (445)
T PRK06820 219 RTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAA 276 (445)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 0699941676898999999876114889998679848998446578888998999864