HHsearch alignment for GI: 255764460 and conserved domain: PRK06904
>PRK06904 replicative DNA helicase; Validated.
Probab=99.50 E-value=2.8e-11 Score=90.87 Aligned_cols=223 Identities=15% Similarity=0.178 Sum_probs=132.3
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHH----HHHHCCCH
Q ss_conf 550147727899972389726880799970687237899999987520-0898799997388556688----99819883
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSIY----ARKLGVDL 119 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~~----a~~~Gvd~ 119 (363)
T Consensus 201 ~~Gi~TG~~~LD~~t--~Gl~~g~LiViAaRPsmGKTa~alnia~n~A~~~~~~V~~fSLEM~~~~l~~R~ls~~s~v~~ 278 (472)
T PRK06904 201 VTGVTTGFTDLDKKT--AGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMLASLSRVDQ 278 (472)
T ss_pred CCEECCCHHHHHHHH--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH
T ss_conf 623228979997441--588757579997379875689999999999995599579977879999999999998649998
Q ss_pred HHE--------------------------EEE-E-C-CCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 344--------------------------897-2-5-84899999999997448-9768998143332202655434555
Q gi|255764460|r 120 KNL--------------------------LIS-Q-P-DTGEQALEITDMLVRSG-AVDIIVIDSVAALTPRAEIEGDMGE 169 (363)
Q Consensus 120 ~~l--------------------------~~~-~-~-~~~E~~~~i~~~li~~~-~~~liViDSi~al~p~~Eie~~~~d 169 (363)
T Consensus 279 ~~i~~g~~l~~~e~~~~~~~~~~l~~~~~l~idd~~~~t~~~i~~~~r~~~~~~~~l~~vvIDYLqL~~~~~~~~----- 353 (472)
T PRK06904 279 TKIRTGQNLDQQDWAKISSTVGMFKQKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFED----- 353 (472)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCC-----
T ss_conf 886468856099999999999998468981684699999999999999999873899789963886604888777-----
Q ss_pred HCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCC--CCCCCCCCCCCEEEEEECCCCCCCC-CEE
Q ss_conf 3022478887677677776420178189998634114566546-65125--6553111111248975045534457-724
Q gi|255764460|r 170 SLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETT--TGGNALKFYSSVRLDIRRVGSIKDK-DSI 245 (363)
Q Consensus 170 ~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~--~GG~al~~~aS~rl~i~k~~~ik~~-~~~ 245 (363)
T Consensus 354 ----~r~~ei~~isr~LK~lAkel~ipvi~LsQLnR~~e~R~dkrP~lsDLReSG~IEqdAD~V~~l~R~~~y~~~~~~~ 429 (472)
T PRK06904 354 ----NRTLEIAEISRSLKALAKELKVPVVALSQLNRTLENRGDKRPVNSDLRESGSIEQDADLIMFIYRDEVYNETTEDN 429 (472)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCHHCCCCCCCCC
T ss_conf ----7889999999999999999799889973268431127999886020225230154286899964420048887677
Q ss_pred EEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHH
Q ss_conf 7679998774057789851589998618742311159
Q gi|255764460|r 246 TGNQTRVKVVKNKMASPFKQVEFDIMYGEGISFFGEL 282 (363)
Q Consensus 246 iG~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~~l 282 (363)
T Consensus 430 ~~-~~elivaKnR~G~~---G~v~~~f~~~~~rF~~~ 462 (472)
T PRK06904 430 KG-VAEIIIGKQRNGPI---GRVRLAFQGQYSRFDNL 462 (472)
T ss_pred CC-CEEEEEECCCCCCC---CEEEEEEECCCCCCCCC
T ss_conf 88-37999974778986---16999985787743045