HHsearch alignment for GI: 255764460 and conserved domain: PRK06904

>PRK06904 replicative DNA helicase; Validated.
Probab=99.50  E-value=2.8e-11  Score=90.87  Aligned_cols=223  Identities=15%  Similarity=0.178  Sum_probs=132.3

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHH----HHHHCCCH
Q ss_conf             550147727899972389726880799970687237899999987520-0898799997388556688----99819883
Q gi|255764460|r   45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSIY----ARKLGVDL  119 (363)
Q Consensus        45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~~----a~~~Gvd~  119 (363)
T Consensus       201 ~~Gi~TG~~~LD~~t--~Gl~~g~LiViAaRPsmGKTa~alnia~n~A~~~~~~V~~fSLEM~~~~l~~R~ls~~s~v~~  278 (472)
T PRK06904        201 VTGVTTGFTDLDKKT--AGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMLASLSRVDQ  278 (472)
T ss_pred             CCEECCCHHHHHHHH--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH
T ss_conf             623228979997441--588757579997379875689999999999995599579977879999999999998649998


Q ss_pred             HHE--------------------------EEE-E-C-CCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf             344--------------------------897-2-5-84899999999997448-9768998143332202655434555
Q gi|255764460|r  120 KNL--------------------------LIS-Q-P-DTGEQALEITDMLVRSG-AVDIIVIDSVAALTPRAEIEGDMGE  169 (363)
Q Consensus       120 ~~l--------------------------~~~-~-~-~~~E~~~~i~~~li~~~-~~~liViDSi~al~p~~Eie~~~~d  169 (363)
T Consensus       279 ~~i~~g~~l~~~e~~~~~~~~~~l~~~~~l~idd~~~~t~~~i~~~~r~~~~~~~~l~~vvIDYLqL~~~~~~~~-----  353 (472)
T PRK06904        279 TKIRTGQNLDQQDWAKISSTVGMFKQKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFED-----  353 (472)
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCC-----
T ss_conf             886468856099999999999998468981684699999999999999999873899789963886604888777-----


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCC--CCCCCCCCCCCEEEEEECCCCCCCC-CEE
Q ss_conf             3022478887677677776420178189998634114566546-65125--6553111111248975045534457-724
Q gi|255764460|r  170 SLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETT--TGGNALKFYSSVRLDIRRVGSIKDK-DSI  245 (363)
Q Consensus       170 ~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~--~GG~al~~~aS~rl~i~k~~~ik~~-~~~  245 (363)
T Consensus       354 ----~r~~ei~~isr~LK~lAkel~ipvi~LsQLnR~~e~R~dkrP~lsDLReSG~IEqdAD~V~~l~R~~~y~~~~~~~  429 (472)
T PRK06904        354 ----NRTLEIAEISRSLKALAKELKVPVVALSQLNRTLENRGDKRPVNSDLRESGSIEQDADLIMFIYRDEVYNETTEDN  429 (472)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCHHCCCCCCCCC
T ss_conf             ----7889999999999999999799889973268431127999886020225230154286899964420048887677


Q ss_pred             EEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHH
Q ss_conf             7679998774057789851589998618742311159
Q gi|255764460|r  246 TGNQTRVKVVKNKMASPFKQVEFDIMYGEGISFFGEL  282 (363)
Q Consensus       246 iG~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~~l  282 (363)
T Consensus       430 ~~-~~elivaKnR~G~~---G~v~~~f~~~~~rF~~~  462 (472)
T PRK06904        430 KG-VAEIIIGKQRNGPI---GRVRLAFQGQYSRFDNL  462 (472)
T ss_pred             CC-CEEEEEECCCCCCC---CEEEEEEECCCCCCCCC
T ss_conf             88-37999974778986---16999985787743045