HHsearch alignment for GI: 255764460 and conserved domain: PRK06936
>PRK06936 type III secretion system ATPase; Provisional.
Probab=97.56 E-value=0.00024 Score=47.10 Aligned_cols=121 Identities=24% Similarity=0.323 Sum_probs=73.1
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-HCCC-HH
Q ss_conf 65501477278999723897268807999706872378999999875200898799997388556-688998-1988-33
Q gi|255764460|r 44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-LGVD-LK 120 (363)
Q Consensus 44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~Gvd-~~ 120 (363)
T Consensus 142 i~epl~TGIraID~llt~g---~GQR~gIfagsGvGKs~Ll~~i~r~~-~adv~V~alIGERgrEv~efie~~l~~~gl~ 217 (439)
T PRK06936 142 IETPLSLGVRVIDGLLTCG---EGQRMGIFAAAGGGKSTLLASLIRSA-EVDVTVLALIGERGREVREFIESDLGEEGLR 217 (439)
T ss_pred CCCCCCCCCEEEECCCCHH---CCCEEECCCCCCCCHHHHHHHHHHHH-CCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 7874226855552468631---05701023699998899999997643-2695799980730899999999864125431
Q ss_pred H--EEEEECCC--HH------HHHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHHHHHH
Q ss_conf 4--48972584--89------999999999744897689981433322-0265543455
Q gi|255764460|r 121 N--LLISQPDT--GE------QALEITDMLVRSGAVDIIVIDSVAALT-PRAEIEGDMG 168 (363)
Q Consensus 121 ~--l~~~~~~~--~E------~~~~i~~~li~~~~~~liViDSi~al~-p~~Eie~~~~ 168 (363)
T Consensus 218 rsvvV~atsd~p~~~R~~aa~~a~aiAEyFrd~G~~VLl~~DslTR~A~A~REI~l~~g 276 (439)
T PRK06936 218 KAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAG 276 (439)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 06999618989989999999887788999985898489993567899999989998668