HHsearch alignment for GI: 255764460 and conserved domain: PRK06995

>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.43  E-value=0.0015  Score=42.07  Aligned_cols=87  Identities=24%  Similarity=0.428  Sum_probs=57.9

Q ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCC-EEEEEECCCCCCH-------HHHHHHCCCHHHEEEEECCCHHHHH
Q ss_conf             26880799970687237899999987520-0898-7999973885566-------8899819883344897258489999
Q gi|255764460|r   64 FPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGG-TCAFVDAEHALDS-------IYARKLGVDLKNLLISQPDTGEQAL  134 (363)
Q Consensus        64 ~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~-~~~~iD~E~~~~~-------~~a~~~Gvd~~~l~~~~~~~~E~~~  134 (363)
T Consensus       173 ~~~ggV~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT~D-TYRIgAvEQLktYa~IlgvP-----v~vv~~~~eL~  246 (404)
T PRK06995        173 MERGGVFALVGPTGVGKTTTTAKLAARCVMRHGASKVALLTTD-SYRIGGHEQLRIYGKILGVP-----VHAVKDAADLR  246 (404)
T ss_pred             HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHCCCE-----EEEECCHHHHH
T ss_conf             1147558986688876375899999999998389837999768-75478999999999875955-----99959999999


Q ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf             99999974489768998143332202
Q gi|255764460|r  135 EITDMLVRSGAVDIIVIDSVAALTPR  160 (363)
Q Consensus       135 ~i~~~li~~~~~~liViDSi~al~p~  160 (363)
T Consensus       247 ~aL~~l---~~~dlILIDTaG-rs~r  268 (404)
T PRK06995        247 LALAEL---RNKHIVLIDTVG-MSQR  268 (404)
T ss_pred             HHHHHH---CCCCEEEEECCC-CCCC
T ss_conf             999970---899999980999-8976