HHsearch alignment for GI: 255764460 and conserved domain: PRK08506
>PRK08506 replicative DNA helicase; Provisional.
Probab=99.47 E-value=5.9e-11 Score=88.85 Aligned_cols=220 Identities=19% Similarity=0.238 Sum_probs=131.8
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH-----HHCCCH
Q ss_conf 550147727899972389726880799970687237899999987520089879999738855668899-----819883
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYAR-----KLGVDL 119 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~-----~~Gvd~ 119 (363)
T Consensus 173 ~~Gi~TGf~~LD~~t--~Gl~~gdLiIIAARPsmGKTAfAlniA~~~a~~~~~V~~FSLEMs~~-ql~~Rlls~~s~V~~ 249 (473)
T PRK08506 173 IIGLDTGFKQLNKMT--KGFNKGDLIIIAARPSMGKTTLVLNMVLKALNQGKGVAFFSLEMPAE-QLMLRMLSAKTSIPL 249 (473)
T ss_pred CCCCCCCHHHHHHHH--CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHHHHHCCCCC
T ss_conf 534778808788872--69985627999507998678999999999996599658982247999-999999997288783
Q ss_pred HHEE-------------------------EEE-C-CCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 3448-------------------------972-5-8489999999999744-8976899814333220265543455530
Q gi|255764460|r 120 KNLL-------------------------ISQ-P-DTGEQALEITDMLVRS-GAVDIIVIDSVAALTPRAEIEGDMGESL 171 (363)
Q Consensus 120 ~~l~-------------------------~~~-~-~~~E~~~~i~~~li~~-~~~~liViDSi~al~p~~Eie~~~~d~~ 171 (363)
T Consensus 250 ~~lr~g~l~~~e~~~~~~a~~~l~~~~l~IdD~~~lti~~Ira~~Rr~k~~~~~l~livIDYLQLm~~~~~~----~~-- 323 (473)
T PRK08506 250 QNLRTGDLDDDEWENLSDACDELSQKKLFVYDSGYVNIHQVRAQLRKLKSQHPEIGLAVIDYLQLMSGSKNF----KD-- 323 (473)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCC----CC--
T ss_conf 100068999999999999999986598899889999999999999999997699878996367554688875----30--
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCCCCC--CCCCCCCCCCEEEEEECCCCCC-----CCC
Q ss_conf 2247888767767777642017818999863411456654-6651256--5531111112489750455344-----577
Q gi|255764460|r 172 PGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMF-GSPETTT--GGNALKFYSSVRLDIRRVGSIK-----DKD 243 (363)
Q Consensus 172 ~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~-g~p~~~~--GG~al~~~aS~rl~i~k~~~ik-----~~~ 243 (363)
T Consensus 324 ---R~~ev~~ISr~LK~lAkEl~vPViaLSQLnR~vE~R~dkrP~lSDLReSGsIEQDADvV~flyR~~yY~~~~~~~~~ 400 (473)
T PRK08506 324 ---RHLQISEISRGLKLLARELDIPIIALSQLNRSLESRADKRPMLSDLRESGAIEQDADIILFVYRDDVYKEREEKEKE 400 (473)
T ss_pred ---HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCHHHCCCCCCCCCC
T ss_conf ---88999999999999999969979997036876555789987600113433135437689996527753665333333
Q ss_pred ---EEEE-------------EEEEEEEEECCCCCCCCEEEEEEECCCCCCCC
Q ss_conf ---2476-------------79998774057789851589998618742311
Q gi|255764460|r 244 ---SITG-------------NQTRVKVVKNKMASPFKQVEFDIMYGEGISFF 279 (363)
Q Consensus 244 ---~~iG-------------~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~ 279 (363)
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~ae~iiaK~RnG~t---G~v~l~f~~~~trF 449 (473)
T PRK08506 401 DKAKKEGKEERRIHKQNKSIEEAEIIIGKNRNGPT---GTVKLIFQKEFTRF 449 (473)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC---CEEEEEEECCCCCC
T ss_conf 32111132111222235677724899965778987---25999986587770