HHsearch alignment for GI: 255764460 and conserved domain: PRK08927

>PRK08927 fliI flagellum-specific ATP synthase; Validated.
Probab=97.75  E-value=0.00024  Score=47.03  Aligned_cols=111  Identities=16%  Similarity=0.220  Sum_probs=70.6

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-H---CCC
Q ss_conf             65501477278999723897268807999706872378999999875200898799997388556-688998-1---988
Q gi|255764460|r   44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-L---GVD  118 (363)
Q Consensus        44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~---Gvd  118 (363)
T Consensus       138 i~e~L~TGIraID~l~p---igrGQRigIfagsGvGKs~Ll~~i~r~~~-adv~VialIGeRgrEv~efi~~~l~~~~l~  213 (441)
T PRK08927        138 VGPPLDLGVRALNTFLT---CCRGQRLGIFAGSGVGKSVLLSMLARNTD-ADVSVIGLIGERGREVQEFLQDDLGPEGLA  213 (441)
T ss_pred             CCCCCCCCHHHHHHHHH---HCCCCEEEECCCCCCCHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf             77631036015653300---20364666316899987899999986416-773787522651899999999872024522


Q ss_pred             HHHEEEEECC--------CHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             3344897258--------489999999999744897689981433322
Q gi|255764460|r  119 LKNLLISQPD--------TGEQALEITDMLVRSGAVDIIVIDSVAALT  158 (363)
Q Consensus       119 ~~~l~~~~~~--------~~E~~~~i~~~li~~~~~~liViDSi~al~  158 (363)
T Consensus       214 rsvvV~atsd~p~~~R~~a~~~A~aiAEyfrd~G~~VLl~~Dsltr~A  261 (441)
T PRK08927        214 RSVVVVATSDEPALMRRQAAYLTLAIAEYFRDQGKDVLCLMDSVTRFA  261 (441)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             458999637898788799998755899999977996799834602888