HHsearch alignment for GI: 255764460 and conserved domain: PRK09099
>PRK09099 type III secretion system ATPase; Provisional.
Probab=97.63 E-value=0.00024 Score=47.06 Aligned_cols=111 Identities=18% Similarity=0.243 Sum_probs=66.9
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHHH-CCC-HH
Q ss_conf 65501477278999723897268807999706872378999999875200898799997388556-6889981-988-33
Q gi|255764460|r 44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARKL-GVD-LK 120 (363)
Q Consensus 44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~~-Gvd-~~ 120 (363)
T Consensus 143 i~epl~TGIraID~l~p---igrGQR~gIf~gsGvGKstLl~~iar~~~~d-v~V~~lIGeRgrEv~efi~~~~~~~~l~ 218 (441)
T PRK09099 143 IEAPLPTGVRIVDGLMT---LGEGQRMGIFAPAGVGKSTLMGMFARGTQCD-VNVIALIGERGREVREFIELILGEDGMA 218 (441)
T ss_pred CCCCCCCCCEEECCCCC---CCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf 78741278562236678---0347633001589887899999898751368-6168863721389999999976245632
Q ss_pred H--EEEEECC-C-HH------HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 4--4897258-4-89------999999999744897689981433322
Q gi|255764460|r 121 N--LLISQPD-T-GE------QALEITDMLVRSGAVDIIVIDSVAALT 158 (363)
Q Consensus 121 ~--l~~~~~~-~-~E------~~~~i~~~li~~~~~~liViDSi~al~ 158 (363)
T Consensus 219 ~svvv~atsd~~~~~R~~a~~~a~aiAEyfrd~Gk~VLl~~DslTr~A 266 (441)
T PRK09099 219 RSVVVCATSDRSSIERAKAAYAATAIAEYFRDRGKRVLLMMDSLTRFA 266 (441)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf 017986158899889999877501578899866981899707677999