HHsearch alignment for GI: 255764460 and conserved domain: PRK09099

>PRK09099 type III secretion system ATPase; Provisional.
Probab=97.63  E-value=0.00024  Score=47.06  Aligned_cols=111  Identities=18%  Similarity=0.243  Sum_probs=66.9

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHHH-CCC-HH
Q ss_conf             65501477278999723897268807999706872378999999875200898799997388556-6889981-988-33
Q gi|255764460|r   44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARKL-GVD-LK  120 (363)
Q Consensus        44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~~-Gvd-~~  120 (363)
T Consensus       143 i~epl~TGIraID~l~p---igrGQR~gIf~gsGvGKstLl~~iar~~~~d-v~V~~lIGeRgrEv~efi~~~~~~~~l~  218 (441)
T PRK09099        143 IEAPLPTGVRIVDGLMT---LGEGQRMGIFAPAGVGKSTLMGMFARGTQCD-VNVIALIGERGREVREFIELILGEDGMA  218 (441)
T ss_pred             CCCCCCCCCEEECCCCC---CCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf             78741278562236678---0347633001589887899999898751368-6168863721389999999976245632


Q ss_pred             H--EEEEECC-C-HH------HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             4--4897258-4-89------999999999744897689981433322
Q gi|255764460|r  121 N--LLISQPD-T-GE------QALEITDMLVRSGAVDIIVIDSVAALT  158 (363)
Q Consensus       121 ~--l~~~~~~-~-~E------~~~~i~~~li~~~~~~liViDSi~al~  158 (363)
T Consensus       219 ~svvv~atsd~~~~~R~~a~~~a~aiAEyfrd~Gk~VLl~~DslTr~A  266 (441)
T PRK09099        219 RSVVVCATSDRSSIERAKAAYAATAIAEYFRDRGKRVLLMMDSLTRFA  266 (441)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             017986158899889999877501578899866981899707677999