HHsearch alignment for GI: 255764460 and conserved domain: PRK09112
>PRK09112 DNA polymerase III subunit delta'; Validated.
Probab=96.21 E-value=0.023 Score=34.51 Aligned_cols=96 Identities=24% Similarity=0.349 Sum_probs=49.3
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HHHHH--CCCHHHEEEEEC-C-------
Q ss_conf 89726880799970687237899999987520089879999738855668--89981--988334489725-8-------
Q gi|255764460|r 61 IGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSI--YARKL--GVDLKNLLISQP-D------- 128 (363)
Q Consensus 61 ~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~--~a~~~--Gvd~~~l~~~~~-~------- 128 (363)
T Consensus 41 ~gRl~HA--~Lf~GP~GiGKaTlA~~~A~~Ll~~~~~~~~~~~~~~pd~~~~~~r~i~~g~hpdl~~i~r~~d~k~~~~~ 118 (352)
T PRK09112 41 EGRLHHA--LLFEGPEGIGKATLAFHLANHILSHPDPNEAPETLADPDPASPLWRQIAQGAHPNLLHLTRPFDEKTGKFK 118 (352)
T ss_pred CCCCCCE--EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHH
T ss_conf 4996524--65358998089999999999986699866686556788878778999974899995655343220214543
Q ss_pred ---CHHHHHHHHHHHH---HCCCCCEEEEECCCCCC
Q ss_conf ---4899999999997---44897689981433322
Q gi|255764460|r 129 ---TGEQALEITDMLV---RSGAVDIIVIDSVAALT 158 (363)
Q Consensus 129 ---~~E~~~~i~~~li---~~~~~~liViDSi~al~ 158 (363)
T Consensus 119 ~~I~vd~iR~l~~~~~~~~~~~~~kv~Iid~ad~m~ 154 (352)
T PRK09112 119 TAITVDEIRRVTHFLSQTSGDGNWRIVIIDPADDMN 154 (352)
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
T ss_conf 357779999999984548866880699981878746