HHsearch alignment for GI: 255764460 and conserved domain: PRK09361

>PRK09361 radB DNA repair and recombination protein RadB; Provisional.
Probab=100.00  E-value=3e-42  Score=286.74  Aligned_cols=214  Identities=27%  Similarity=0.463  Sum_probs=175.8

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH-CCCH----
Q ss_conf             55014772789997238972688079997068723789999998752008987999973885566889981-9883----
Q gi|255764460|r   45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKL-GVDL----  119 (363)
Q Consensus        45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~-Gvd~----  119 (363)
T Consensus         2 ~erisTG~~~lD~~Lg-GGi~~G~itei~G~pG~GKTtl~lq~a~~~~~~g~~vlYidtE~-~~~er~~qi~~~~~~~~~   79 (224)
T PRK09361          2 EELLPTGCKSLDELLG-GGIERGTITQIYGPPGSGKTNICIQLAVEAARQGKKVIYIDTEG-LSPERFKQIAGEDFEELL   79 (224)
T ss_pred             CCEECCCCHHHHHHHC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHCCCHHHHH
T ss_conf             8530379789998626-99888879999899998599999999999997499099967876-788999998565734542


Q ss_pred             HHEEEEECCCHHHHHHHH---HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             344897258489999999---99974489768998143332202655434555302247888767767777642017818
Q gi|255764460|r  120 KNLLISQPDTGEQALEIT---DMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCI  196 (363)
Q Consensus       120 ~~l~~~~~~~~E~~~~i~---~~li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~  196 (363)
T Consensus        80 ~~i~~~~~~~~~~~~~~i~~~~~~~~-~~~~lvVIDSi~~~~-~~e~~~----~~~~~~~~~l~~~~~~L~~~a~~~~~~  153 (224)
T PRK09361         80 SNIIIFEPSSFEEQREAIQKAEKIAK-ENVGLIVLDSATSLY-RLELDD----NDNSKLNRELGKQISHLLSLARKHNIA  153 (224)
T ss_pred             HCCEEECCCCHHHHHHHHHHHHHHHH-CCCCEEEEECCHHHE-EHHCCC----CCCHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             06147247988999999999998750-587389996230100-000145----765899999999999999999971986


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCC
Q ss_conf             99986341145665466512565531111112489750455344577247679998774057789851589998618742
Q gi|255764460|r  197 LVFINQMRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSITGNQTRVKVVKNKMASPFKQVEFDIMYGEGI  276 (363)
Q Consensus       197 ~i~iNQ~r~~ig~m~g~p~~~~GG~al~~~aS~rl~i~k~~~ik~~~~~iG~~v~~kv~Knk~~~P~~~a~~~i~fg~GI  276 (363)
T Consensus       154 vvl~nqV~~~~~~~~~~p---aGg~~l~h~~d~~l~le~~~-----~---~-~R~l~v~Knr~~p~~~~~~f~it-~~Gi  220 (224)
T PRK09361        154 VVITNQVYSDIDSDGLRP---LGGHTLEHWSKAILRLEKLR-----N---G-KRRATLEKHRSRPEGESAEFRIT-DRGI  220 (224)
T ss_pred             EEEEEEEEECCCCCCCCC---CCCCCEEEEEEEEEEEEECC-----C---C-EEEEEEEECCCCCCCCEEEEEEC-CCCC
T ss_conf             999966885267654444---65412221057999996258-----9---7-79999975898999967999986-8986


Q ss_pred             CCC
Q ss_conf             311
Q gi|255764460|r  277 SFF  279 (363)
Q Consensus       277 ~~~  279 (363)
T Consensus       221 ~~v  223 (224)
T PRK09361        221 EDV  223 (224)
T ss_pred             CCC
T ss_conf             457