HHsearch alignment for GI: 255764460 and conserved domain: PRK11823
>PRK11823 DNA repair protein RadA; Provisional.
Probab=99.88 E-value=7.9e-21 Score=151.28 Aligned_cols=206 Identities=26% Similarity=0.371 Sum_probs=154.5
Q ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHHHHHCCCH
Q ss_conf 34655014772789997238972688079997068723789999998752008987999973885566--8899819883
Q gi|255764460|r 42 FEGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDS--IYARKLGVDL 119 (363)
Q Consensus 42 ~~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~--~~a~~~Gvd~ 119 (363)
T Consensus 66 ~~~~~R~~Tgi~ElDRVLG-GGlV~GS~iLlgGePGIGKSTLlLQ~a~~la-~~~~vLYvSGEES~~Qik~RA~RLg~~~ 143 (454)
T PRK11823 66 AEEEPRISTGIGELDRVLG-GGLVPGSVVLIGGDPGIGKSTLLLQVAAALA-AGGKVLYVSGEESLQQIKLRAERLGLPS 143 (454)
T ss_pred CCCCCCCCCCCHHHHHCCC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHH-CCCCEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf 6665532378556652215-8720664899507998889999999999985-5995799815015789999999758888
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 34489725848999999999974489768998143332202655434555302247888767767777642017818999
Q gi|255764460|r 120 KNLLISQPDTGEQALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVF 199 (363)
Q Consensus 120 ~~l~~~~~~~~E~~~~i~~~li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~ 199 (363)
T Consensus 144 ~~l~l~~et~l~~Il~~i~~~----~P~~lIIDSIQT~~~-~~~~s~pGs--v-sQVre~a~~---L~~~AK~~~i~~~l 212 (454)
T PRK11823 144 DNLYLLAETNLEDILATIEEE----KPDLVVIDSIQTMYS-PELESAPGS--V-SQVRECAAE---LTRLAKQSGIAVFL 212 (454)
T ss_pred CCCEEEECCCHHHHHHHHHHH----CCCEEEEECHHEEEE-CCCCCCCCC--H-HHHHHHHHH---HHHHHHHCCCCEEE
T ss_conf 873788536899999999860----998899943111541-566778997--8-999999999---99999744982899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEE-EEEEECCCCCCCCEEEEEEECCCCCCC
Q ss_conf 8634114566546651256553111111248975045534457724767999-877405778985158999861874231
Q gi|255764460|r 200 INQMRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSITGNQTR-VKVVKNKMASPFKQVEFDIMYGEGISF 278 (363)
Q Consensus 200 iNQ~r~~ig~m~g~p~~~~GG~al~~~aS~rl~i~k~~~ik~~~~~iG~~v~-~kv~Knk~~~P~~~a~~~i~fg~GI~~ 278 (363)
T Consensus 213 VGHVTKd-G~i-------AGPkvLEHmVDtVl~fEGd~---------~~~~RiLR~~KNRFG~t~EiGvFeM-~~~GL~~ 274 (454)
T PRK11823 213 VGHVTKE-GAI-------AGPRVLEHMVDTVLYFEGDR---------HSRFRILRAVKNRFGATNEIGVFEM-TEKGLRE 274 (454)
T ss_pred EEEECCC-CCC-------CCCHHHHHHHCEEEEECCCC---------CCCCEEEEEECCCCCCCCEEEEEEE-CCCCCEE
T ss_conf 9977267-764-------66145222010468751576---------6550245631246776660589986-1688456