HHsearch alignment for GI: 255764460 and conserved domain: PRK13853

>PRK13853 type IV secretion system protein VirB4; Provisional.
Probab=96.11  E-value=0.015  Score=35.69  Aligned_cols=63  Identities=27%  Similarity=0.438  Sum_probs=42.2

Q ss_pred             CCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHHHHHC
Q ss_conf             772789997238972688079997068723789999998752008----9879999738855668899819
Q gi|255764460|r   50 SGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKT----GGTCAFVDAEHALDSIYARKLG  116 (363)
Q Consensus        50 TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~----g~~~~~iD~E~~~~~~~a~~~G  116 (363)
T Consensus       412 ~~gtPf~fn~H~~d--~G-Ht~I~G~TGsGKTtll~fL~aq~~ky~~~~~~~~~~fDkd~s~~i-~~~a~G  478 (789)
T PRK13853        412 NGGTPFDYIPHEHD--VG-MTAIFGPIGRGKTTLMTFILAMLEQSMVDRAGAVVFFDKDRGGEL-LVRATG  478 (789)
T ss_pred             CCCCCEEEECCCCC--CC-CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH-HHHHHC
T ss_conf             99982586378788--77-448878999988999999999999742235770899958863899-999829