HHsearch alignment for GI: 255764460 and conserved domain: PRK13898
>PRK13898 type IV secretion system ATPase VirB4; Provisional.
Probab=96.65 E-value=0.0055 Score=38.43 Aligned_cols=48 Identities=33% Similarity=0.459 Sum_probs=40.1
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHC
Q ss_conf 80799970687237899999987520089879999738855668899819
Q gi|255764460|r 67 GRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLG 116 (363)
Q Consensus 67 Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~G 116 (363)
T Consensus 447 G-HtlI~G~TGsGKTtl~~fL~aq~~ky~~~~f~fDkd~~~~-i~~~a~G 494 (800)
T PRK13898 447 G-HTLIIGPTGAGKTVLMNFLCAQAMKFSPRMFFFDKDRGAE-IFIRALN 494 (800)
T ss_pred C-CEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHH-HHHHHHC
T ss_conf 7-5699899999899999999999875488799997999869-9999829