>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.

Probab=100.00 E-value=1.4e-34 Score=238.27 Aligned_cols=205 Identities=26% Similarity=0.405 Sum_probs=167.8 Q ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH----CCCHH----HEEEEE Q ss_conf 9997238972688079997068723789999998752008987999973885566889981----98833----448972 Q gi|255764460|r 55 LDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKL----GVDLK----NLLISQ 126 (363) Q Consensus 55 lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~----Gvd~~----~l~~~~ 126 (363) T Consensus 1 iD~LLg-GGvE~G~iTQiYGp~G~GKTn~c~~~a~~a~~~Gk~v~YiDTEGGLS~ER~~q~~~~~~~D~e~~~~~~iv~~ 79 (223) T TIGR02237 1 IDELLG-GGVERGIITQIYGPPGSGKTNICLILAVNAARQGKKVVYIDTEGGLSPERFKQIAEDRALDPERVLSNVIVFE 79 (223) T ss_pred CCCCCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCEEEEC T ss_conf 952205-8512035889875899867899999999998618958999628983289999986305889888841535523 Q ss_pred CCC-HHH--HHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE Q ss_conf 584-899--999999997448--976899814333220265543455530224788876776777764201781899986 Q gi|255764460|r 127 PDT-GEQ--ALEITDMLVRSG--AVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFIN 201 (363) Q Consensus 127 ~~~-~E~--~~~i~~~li~~~--~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iN 201 (363) T Consensus 80 ~~~f~eQ~~ai~~~~~~~~~~G~~~~LvVvDs~t~~Y-Rle~~~d~n--k~~~~~~~l~~Ql~~Ll~lArk~~~AVviTN 156 (223) T TIGR02237 80 VFDFDEQEVAIQKTSKLIDRDGDKADLVVVDSFTALY-RLERSDDRN--KQISLNRELARQLTLLLSLARKKDLAVVITN 156 (223) T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH-HHCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 5356789999999999986068833148881533454-202578602--5679999999999999999876499789971 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEE Q ss_conf 3411456654665125655311111124897504553445772476799987740577898515899986 Q gi|255764460|r 202 QMRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSITGNQTRVKVVKNKMASPFKQVEFDIM 271 (363) Q Consensus 202 Q~r~~ig~m~g~p~~~~GG~al~~~aS~rl~i~k~~~ik~~~~~iG~~v~~kv~Knk~~~P~~~a~~~i~ 271 (363) T Consensus 157 Qvy~d~~~gG~~~~~P~GG~~L~h~~K~i~rLE~~~r-------~G~R-~a~L~kHR~~~EG~~v~FrIt 218 (223) T TIGR02237 157 QVYTDVNNGGSETLRPLGGHLLEHWSKVILRLEKLNR-------VGRR-KATLEKHRSRKEGESVKFRIT 218 (223) T ss_pred EEEEEECCCCCCEEEECCCHHHHHHHCEEEEEECCCC-------CCCE-EEEEEECCCCCCCCEEEEEEE T ss_conf 1588637797320100331134311021335644789-------8742-456654055789975789982

HHsearch alignment for GI: 255764460 and conserved domain: TIGR02237