HHsearch alignment for GI: 255764460 and conserved domain: TIGR03497
>TIGR03497 FliI_clade2 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=97.66 E-value=0.00029 Score=46.53 Aligned_cols=122 Identities=22% Similarity=0.300 Sum_probs=74.5
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-HCCC-H
Q ss_conf 465501477278999723897268807999706872378999999875200898799997388556-688998-1988-3
Q gi|255764460|r 43 EGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-LGVD-L 119 (363)
Q Consensus 43 ~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~Gvd-~ 119 (363)
T Consensus 116 ~i~e~l~TGIraID~l~p---igrGQRigIfag~GvGKt~Ll~~ia~~~~-adv~Vi~liGERgrEv~ef~~~~l~~~~l 191 (413)
T TIGR03497 116 RIRDPLETGIKAIDGLLT---IGKGQRVGIFAGSGVGKSTLLGMIARNAK-ADINVIALIGERGREVRDFIEKDLGEEGL 191 (413)
T ss_pred CCCCEEECCCEEECCCCC---CCCCCEEEECCCCCCCHHHHHHHHHHHHC-CCCCEEEEEEEECHHHHHHHHHHHCCCCC
T ss_conf 788342038654216576---11375442105899877699999998743-78523888633228999999986312564
Q ss_pred HH--EEEEECC--------CHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHHHHHH
Q ss_conf 34--4897258--------489999999999744897689981433322-0265543455
Q gi|255764460|r 120 KN--LLISQPD--------TGEQALEITDMLVRSGAVDIIVIDSVAALT-PRAEIEGDMG 168 (363)
Q Consensus 120 ~~--l~~~~~~--------~~E~~~~i~~~li~~~~~~liViDSi~al~-p~~Eie~~~~ 168 (363)
T Consensus 192 ~rtvvv~atsd~p~~~r~~a~~~a~aiAEyfrd~Gk~VLl~~Dsltr~A~A~REisl~~g 251 (413)
T TIGR03497 192 KRSVVVVATSDQPALMRLKAAFTATAIAEYFRDQGKDVLLMMDSVTRFAMAQREIGLAVG 251 (413)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 215999845878879998877463278999986799689997371298899999998658