>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.

Probab=97.52 E-value=0.00077 Score=43.85 Aligned_cols=112 Identities=14% Similarity=0.266 Sum_probs=69.9 Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH---HH-CCCEEEEEECCCCCC--HHHHHHH-- Q ss_conf 655014772789997238972688079997068723789999998752---00-898799997388556--6889981-- Q gi|255764460|r 44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQS---QK-TGGTCAFVDAEHALD--SIYARKL-- 115 (363) Q Consensus 44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~---qk-~g~~~~~iD~E~~~~--~~~a~~~-- 115 (363) T Consensus 49 v~e~l~TGIkaID~l~p---ig~GQR~gIfgg~GvGKs~L~~~i~~~~~~~~~~~~~v~V~~~IGer~rev~e~~~~l~~ 125 (276) T cd01135 49 PEEMIQTGISAIDGMNT---LVRGQKIPIFSGSGLPHNELAAQIARQAGVVGEEENFAVVFAAMGITMEDARFFKDDFEE 125 (276) T ss_pred CCCCCCCCCEEEECCCC---CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHC T ss_conf 78632258535405467---236766332057886367899999998775136887359996155532579999999871 Q ss_pred -C-CCHHHEEEEECCC--HH------HHHHHHHHHH-HCCCCCEEEEECCCCCC Q ss_conf -9-8833448972584--89------9999999997-44897689981433322 Q gi|255764460|r 116 -G-VDLKNLLISQPDT--GE------QALEITDMLV-RSGAVDIIVIDSVAALT 158 (363) Q Consensus 116 -G-vd~~~l~~~~~~~--~E------~~~~i~~~li-~~~~~~liViDSi~al~ 158 (363) T Consensus 126 ~~~l~~tvvv~ata~~~p~~r~~a~~~a~aiAEyFr~~~Gk~VLl~~D~ltr~A 179 (276) T cd01135 126 TGALERVVLFLNLANDPTIERIITPRMALTTAEYLAYEKGKHVLVILTDMTNYA 179 (276) T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH T ss_conf 665121014663488976888788888778999988736997799945688999

HHsearch alignment for GI: 255764460 and conserved domain: cd01135