>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=97.52  E-value=0.0019  Score=41.40  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=30.6

Q ss_pred             CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC-CCEEEEEECC
Q ss_conf             8972688079997068723789999998752008-9879999738
Q gi|255764460|r   61 IGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKT-GGTCAFVDAE  104 (363)
Q Consensus        61 ~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~-g~~~~~iD~E  104 (363)
T Consensus        19 ~Gti~~GEiv~liGpNGaGKSTLl-k~l~Gll~p~~G~I-~~~g~   61 (246)
T cd03237          19 GGSISESEVIGILGPNGIGKTTFI-KMLAGVLKPDEGDI-EIELD   61 (246)
T ss_pred             CCCCCCCCEEEEECCCCCHHHHHH-HHHHCCCCCCCCEE-EECCC
T ss_conf             884657989999979997699999-99977878886079-98982