HHsearch alignment for GI: 255764460 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.35 E-value=0.0025 Score=40.59 Aligned_cols=43 Identities=21% Similarity=0.415 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 72688079997068723789999998752008987999973885
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHA 106 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~ 106 (363)
T Consensus 23 ~i~~Ge~~~iiGpsGsGKSTLl-~~i~gl~~p~~G~I~~~g~~i 65 (241)
T cd03256 23 SINPGEFVALIGPSGAGKSTLL-RCLNGLVEPTSGSVLIDGTDI 65 (241)
T ss_pred EECCCCEEEEECCCCCHHHHHH-HHHHCCCCCCCEEEEECCEEC
T ss_conf 9999989999999983399999-999749999855999999998