RPSBLAST alignment for GI: 255764460 and conserved domain: cd01123
>gnl|CDD|29989 cd01123, Rad51_DMC1_radA, Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .. Length = 235
Score = 74.1 bits (182), Expect = 6e-14
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 39/252 (15%)
Query: 48 VSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQK------TGGTCAFV 101
+++GS LD LG GG G I EI+G SGKT L Q G ++
Sbjct: 1 LTTGSKALDELLG-GGIETGSITEIFGEFGSGKTQLCHQLAVTVQLPIELGGLEGKAVYI 59
Query: 102 DAEHA-----LDSIYARKLGVDLKNLL----ISQPDTGEQALEITD----MLVRSGAVDI 148
D E L I A + G+D + +L +++ + L++ + +L+ S + +
Sbjct: 60 DTEGTFRPERLVQI-AERFGLDPEEVLDNIYVARAYNSDHQLQLLEELEAILIESSRIKL 118
Query: 149 IVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIG 208
+++DSV AL RAE +G GE + + +++ LR L +V NQ+ +
Sbjct: 119 VIVDSVTALF-RAEFDG-RGEL--AERQQHLAKLLRTLKRLADEFNVAVVITNQVTARPD 174
Query: 209 VM---FGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSITGNQTRVKVVKNKMASPFKQ 265
G P+ GGN S+ RL +R+ G + K+V + P +
Sbjct: 175 GAAMFGGDPKKPAGGNIWAHASTTRLYLRKGR---------GEERIAKIVDSPHL-PEGE 224
Query: 266 VEFDIMYGEGIS 277
F I EGI
Sbjct: 225 AVFAI-TEEGIR 235