HHsearch alignment for GI: 255764461 and conserved domain: PRK00390
>PRK00390 leuS leucyl-tRNA synthetase; Validated.
Probab=100.00 E-value=0 Score=629.13 Aligned_cols=452 Identities=24% Similarity=0.387 Sum_probs=338.0
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 88881799788899998832224789789999999988589803623643702279999999839998999999999999
Q gi|255764461|r 2 KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81 (511)
Q Consensus 2 ~~~~~~~vt~~~Py~ng~lHlGH~~~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~g~~p~e~~~~~~~~~~ 81 (511)
T Consensus 29 ~~~~k~yvld~~PYpsG~lH~GH~~~~ti~Dii~Rykrm~G~~Vl~p~GwD~~GLPaE~~aik~~~~p~~~t~~nI~~~k 108 (822)
T PRK00390 29 DSKPKYYVLDMFPYPSGGLHMGHVRNYTIGDVIARYKRMQGYNVLHPMGWDAFGLPAENAAIKTGTHPAEWTYENIANMK 108 (822)
T ss_pred CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 78998079377999898611325564789999999987189963898973668868989999949988999999999999
Q ss_pred HHHHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 999980889886--747788889999999988875431022110001011334301556672111222222223320000
Q gi|255764461|r 82 DMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159 (511)
Q Consensus 82 ~~~~~~~i~~D~--~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~~~~p~~~ 159 (511)
T Consensus 109 ~q~k~lG~~~DW~r~~~T~dp~y~~~~qw~F~~l~ekGliyr~~~~V~Wcp~~~T~LAn~eV~~G----~~~r~~~~V~~ 184 (822)
T PRK00390 109 KQLKSLGFSYDWSREIATCDPEYYKWTQWLFLKLYEKGLAYRKESPVNWCPVDQTVLANEQVIDG----RSWRSGAPVEK 184 (822)
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHCCC----CCCCCCCEEEE
T ss_conf 99998395430689877578779999999999999889979523242007976877650444147----64346870466
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC----------------------------------------CCCCCC--------CHH-
Q ss_conf 3454434466644444344433----------------------------------------332100--------067-
Q gi|255764461|r 160 MEEEGYFFRLSAYQDKLLSYYE----------------------------------------SHPEFI--------LPI- 190 (511)
Q Consensus 160 ~~~~~~f~~l~~~~~~l~~~~~----------------------------------------~~~~~~--------~p~- 190 (511)
T Consensus 185 k~~~qw~~kit~Ya~~Ll~~l~~l~~wP~~vk~mQ~nWIG~s~g~~v~F~~~~~~~~l~v~TTrP~Tl~G~t~~~v~p~h 264 (822)
T PRK00390 185 KELPQWFLKITDYADELLDDLDELDGWPEKVKTMQRNWIGRSEGAEVTFKVKGSDEKLEVFTTRPDTLFGATYLVLAPEH 264 (822)
T ss_pred EECCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEECCHHHHCCCCEEEEECCC
T ss_conf 30440355200758887502100246607776653043342000798633169985599996883352286279993797
Q ss_pred ---------------------------------------------------------------------------H----
Q ss_conf ---------------------------------------------------------------------------6----
Q gi|255764461|r 191 ---------------------------------------------------------------------------E---- 191 (511)
Q Consensus 191 ---------------------------------------------------------------------------~---- 191 (511)
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ek~G~~~G~~~~~P~~~~~iPI~~ad~V~~~~GTG~V~~~PaHd~~D 344 (822)
T PRK00390 265 PLAEKLAEQNPAVAAFIEECKNKSDLERTLATKEKTGVFTGLYAIHPLTGEKIPVWIANYVLMDYGTGAVMAVPAHDQRD 344 (822)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCEEECEECCCEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHH
T ss_conf 89999984489999999998712436665531501010058589777889655699625252457877267568788789
Q ss_pred -------------------------------------------HHHHHHHHCC-C---------CCCCCCCCCCCCCCCC
Q ss_conf -------------------------------------------5457754103-4---------5675323433377765
Q gi|255764461|r 192 -------------------------------------------RRNEVISFVK-S---------GLKDLSLSRKTFDWGI 218 (511)
Q Consensus 192 -------------------------------------------~~~~~~~wl~-~---------gl~Dw~ISR~~~~WGi 218 (511)
T Consensus 345 ~~~a~k~~Lpi~~Vi~~~~~~~~~~~~G~lins~~~~Gl~~~eA~~~ii~~L~~~g~g~~~i~yrLRDW~iSRQR-yWG~ 423 (822)
T PRK00390 345 FEFAKKYGLPIKQVIGGDVSEEAYTEDGVLINSGELDGLDSEEAKEAIIAWLEEKGLGKRKVNYRLRDWGISRQR-YWGE 423 (822)
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCC-CCCC
T ss_conf 999998299824763788766545577148763421786468899999999997799866341012663221120-2578
Q ss_pred CCCCC-----------------------------------------------------CCCCCCCCHHHHHHHHCC---C
Q ss_conf 78642-----------------------------------------------------221464602444322001---2
Q gi|255764461|r 219 KIPDD-----------------------------------------------------PQYIMYVWIDALTNYLTT---T 242 (511)
Q Consensus 219 piP~~-----------------------------------------------------~~~~~YVWfDa~~gY~s~---~ 242 (511)
T Consensus 424 PIPi~~c~~~~~v~v~e~~Lpv~LPe~~~~~~~g~~PL~~~~~w~~~~c~~~g~~~~RetDt~DtW~dSsW-Y~~ry~~p 502 (822)
T PRK00390 424 PIPIIHCEDCGVVPVPEDDLPVVLPEDVVPDGTGESPLAKHPEWVNVTCPKCGKPARRETDTMDTFVGSSW-YYLRYTDP 502 (822)
T ss_pred CEEEEEECCCCEEEEEHHHCCCCCHHHEECCCCCCCHHHHCCCCEEEECCCCCCCCEECCCCCCEEECCCC-EEEECCCC
T ss_conf 40389957897787107875534600130068899946847001752147778721453531020113544-00001577
Q ss_pred C---CCCCCCCCCCCCCCCCHHCCCCCCCCHHC---CHHHHHHHHHHH----HCCCCCCCCCCEEE--------------
Q ss_conf 3---46765431000241100004564321000---102477654331----01232333430330--------------
Q gi|255764461|r 243 G---YLDNPDGSKAKFWPADLHVIGKDILRFHA---IYWPAFLLSANL----PLPKKVFSHGFILH-------------- 298 (511)
Q Consensus 243 ~---~~~~~~~~~~~~w~~d~~~~G~Dii~Fh~---i~~pa~l~~~~~----~~p~~i~~~g~l~~-------------- 298 (511)
T Consensus 503 ~~~~~~~d-~~~~~yw~PvD~YigG~EHailHLlYsRF~~~~l~dlg~~~~~ePF~~l~~qGmVl~~~~~~~~~~~~~~~ 581 (822)
T PRK00390 503 HNDEAMFD-KEAANYWLPVDQYIGGIEHAVLHLLYARFFHKVLRDLGLVSSDEPFKKLLTQGMVLGETYYDERGNWVSPA 581 (822)
T ss_pred CCCCCCCC-HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCEEECCCCCCCCCCCCCHH
T ss_conf 64446679-77886028961401644566778888889999998716755677757750445684254444567766601
Q ss_pred -----------CCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCHHHHH
Q ss_conf -----------586010000022111000000221112111000024787301112221110013321102210213455
Q gi|255764461|r 299 -----------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 (511)
Q Consensus 299 -----------~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~~~~~n~~L~~~lgN~~~R~~~ 367 (511)
T Consensus 582 ~v~~~~~~~~~~g~KMSKSkGNvv~P~~ii~~yGADalRl~~l~~ap~~~d~~ws~~~i~g~~r--fl~rlw~~~~~--- 656 (822)
T PRK00390 582 DVEVERDEKRIGGIKMSKSKGNVVDPDDIIDKYGADTARLFEMFAGPPEKDLEWSDSGVEGAYR--FLQRVWRLVYD--- 656 (822)
T ss_pred HEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHC---
T ss_conf 1242045567677616765789689899987548079999999608856661204878999999--99999997304---
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH
Q ss_conf 65312332103455589556566789999999999877503589999999999999978865418701216999999999
Q gi|255764461|r 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 (511)
Q Consensus 368 f~~k~~~g~ip~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~~~~N~yi~~~~PW~l~k~d~~~~~~v 447 (511)
T Consensus 657 ----------~~~~~~~~~d~~l~~~l~~~I~~vt~~~e~~~fn~ai~~l~~f~N~l~k~---------------~~~~~ 711 (822)
T PRK00390 657 ----------EGAVAALEADKELRRALHKTIKKVTEDIERLRFNTAIAALMELVNALSKA---------------PDRAV 711 (822)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---------------HHHHH
T ss_conf ----------44556872319999999999999999997667769999999999999872---------------51899
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC--CCCHHHHCCCC
Q ss_conf 99999999999998543224899999998498800--07955510126
Q gi|255764461|r 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493 (511)
Q Consensus 448 l~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~~~~--~~~~~~~~~~l 493 (511)
T Consensus 712 l~---~~l~~l~rlLaPf~PhiaEElW~~Lg~~~sV~~~~WP~~de~~ 756 (822)
T PRK00390 712 LR---EALEILVRLLAPFAPHIAEELWQELGHEGSIANAPWPEVDEAA 756 (822)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHH
T ss_conf 99---9999999999878899999999977999856458999678788