HHsearch alignment for GI: 255764461 and conserved domain: PRK12268
>PRK12268 methionyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1041.61 Aligned_cols=502 Identities=32% Similarity=0.585 Sum_probs=469.7
Q ss_pred CEEEEECCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 8179978889999883222478-978999999998858980362364370227999999983999899999999999999
Q gi|255764461|r 5 EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83 (511)
Q Consensus 5 ~~~~vt~~~Py~ng~lHlGH~~-~~i~~D~~~R~~r~~G~~v~~~~g~D~hg~~i~~~A~~~g~~p~e~~~~~~~~~~~~ 83 (511)
T Consensus 3 ~k~~iTt~~Py~nG~lHiGH~~~~~l~aDi~aRy~R~~G~~v~~~~GtD~hG~~i~~~A~k~g~~p~e~~~~~~~~~~~~ 82 (558)
T PRK12268 3 MRILITSAWPYANGPLHLGHLAGSYLPADVYARYQRLKGNEVLFVSGSDEHGTPIELEAEKEGVSPQELADKYHEEHKED 82 (558)
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 51898479988889855231114198999999999837998797584064749999999985999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHCCCCC--------CCC------
Q ss_conf 998088988674778888999999998887543102211000101133430155667211122--------222------
Q gi|255764461|r 84 ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQY------ 149 (511)
Q Consensus 84 ~~~~~i~~D~~~rT~~~~~~~~~~~~~~~l~~~G~iy~~~~~~~y~~~~~~~~~~~~v~~~~~--------~~~------ 149 (511)
T Consensus 83 ~~~lgis~D~f~rT~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~yc~~~~~fl~d~~v~G~cP~c~~~~~~Gd~ce~cg~ 162 (558)
T PRK12268 83 FEKLGISYDNYTRTTSPEHHELVQEFFLKLYENGYIEKKTIEQAYCPSDGRFLPDRYVEGTCPYCGYEKARGDQCDNCGA 162 (558)
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCC
T ss_conf 99819837768668988999999999999998899330135343684112313123315406776874356732532476
Q ss_pred -----------CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf -----------222332000034544344666444443444333321000676545775410345675323433377765
Q gi|255764461|r 150 -----------YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218 (511)
Q Consensus 150 -----------~~~~~~p~~~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~p~~~~~~~~~wl~~gl~Dw~ISR~~~~WGi 218 (511)
T Consensus 163 ~~~~~dli~p~~~~~g~~~e~~~~~~~f~~l~~~~~~l~~~~~~~~~--~p~~~~~~~~~~l~~~l~D~~ISR~~-~WGi 239 (558)
T PRK12268 163 LLDPTDLINPRSKISGSTPEFRETEHFFLDLPAFQEALRKWIESGTD--WPPNVLNFTLNWLKEGLKPRAITRDL-PWGI 239 (558)
T ss_pred CCCHHHHCCCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHCCCCCCCCCCCC-CCCE
T ss_conf 47857724885677899444773453021418778999999853887--78899999999986337565455538-7865
Q ss_pred CCC--CCCCCCCCCCHHHHHHHHCCCCCCCCC---CCCCCCCCCCC----HHCCCCCCCCHHCCHHHHHHHHHH--HHCC
Q ss_conf 786--422214646024443220012346765---43100024110----000456432100010247765433--1012
Q gi|255764461|r 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSAN--LPLP 287 (511)
Q Consensus 219 piP--~~~~~~~YVWfDa~~gY~s~~~~~~~~---~~~~~~~w~~d----~~~~G~Dii~Fh~i~~pa~l~~~~--~~~p 287 (511)
T Consensus 240 piP~~~~~~~~iyVW~Da~~~yis~~~~~~~~~~~~~~~~~~W~~~~~~~~~f~GkDii~FH~v~wpa~l~a~~~~~~lP 319 (558)
T PRK12268 240 PIPFEGAEGKVFYVWFDAPIGYISATKEWAKRKGDPEAWKEFWLDSDTKYYYFIGKDNIPFHSVIWPAMLLGSGEPYKLP 319 (558)
T ss_pred ECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 78855568967988657872203433654541698567987278998427764366654347879999997337987788
Q ss_pred CCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCHHHHH
Q ss_conf 32333430330586010000022111000000221112111000024787301112221110013321102210213455
Q gi|255764461|r 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367 (511)
Q Consensus 288 ~~i~~~g~l~~~G~KMSKS~GN~I~~~e~l~~~g~D~lR~~l~~~~~~~~D~~Fs~~~~~~~~n~~L~~~lgN~~~R~~~ 367 (511)
T Consensus 320 ~~i~~~g~~~~~G~KmSKS~Gnvi~p~~~i~~yg~D~lRy~L~~~~~~~~D~~fs~~~~~~~~N~dL~~~~gNl~~R~~~ 399 (558)
T PRK12268 320 TAIVSSEYLTYEGQKFSKSRGWGIWVDDALERLPPDYLRYYLAANAPENSDTDFTWEEFIRRVNSELADKYGNLVNRVLS 399 (558)
T ss_pred CEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77877556874684114557887798999987490777899885488888888799999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH
Q ss_conf 65312332103455589556566789999999999877503589999999999999978865418701216999999999
Q gi|255764461|r 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447 (511)
Q Consensus 368 f~~k~~~g~ip~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~~~~N~yi~~~~PW~l~k~d~~~~~~v 447 (511)
T Consensus 400 ~~~k~~~g~~p~~~~~~~~d~~l~~~~~~~~~~v~~~~e~~~~~~Al~~i~~~~~~~N~y~~~~~PW~l~k~d~~~~~~v 479 (558)
T PRK12268 400 FIEKNFGGEVPEPGELGEEDEELLEKFQELFKEVGEHYEAIEFKKALEEIMELARLANKYLNEKAPWKLAKTDPERAAAV 479 (558)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH
T ss_conf 99986589789876798565999999999999999999751799999999999999999998379854316899999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC-CCCHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998543224899999998498800-0795551012689973368777643234
Q gi|255764461|r 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510 (511)
Q Consensus 448 l~~~l~~l~~l~ilL~Pi~P~~ae~i~~~Lg~~~~-~~~~~~~~~~l~~~~~i~~~~epLF~Ri 510 (511)
T Consensus 480 l~~~l~~lr~~~ilL~P~mP~~se~i~~~Lg~~~~~~~~w~~~~~~l~~g~~i~~-~~pLF~Ri 542 (558)
T PRK12268 480 LYTALNLVKLLAILLYPFLPFSAEKIWEMLGLPNIEKLSWEEAADPLEPGHSLNK-PEPLFRKI 542 (558)
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC-CCCCCCCC
T ss_conf 9999999999999986740399999999849997755551443156899599789-87685888