HHsearch alignment for GI: 255764461 and conserved domain: cd00805
>cd00805 TyrRS_core Tyrosinyl-tRNA synthetase (TyrRS) catalytic core domain. TyrRS is a homodimer, which attaches Tyr to the appropriate tRNA. TyrRS is a class I tRNA synthetases, so it aminoacylates the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formationof the enzyme bound aminoacyl-adenylate. It contains the class I characteristic HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=94.44 E-value=0.12 Score=31.30 Aligned_cols=47 Identities=26% Similarity=0.213 Sum_probs=28.7
Q ss_pred CCHHCCCCCCCCHHCCHHHHHHHHH------HHHCCCCCCCCCCEE-ECCCCCCHHHCCCCC
Q ss_conf 1000045643210001024776543------310123233343033-058601000002211
Q gi|255764461|r 258 ADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312 (511)
Q Consensus 258 ~d~~~~G~Dii~Fh~i~~pa~l~~~------~~~~p~~i~~~g~l~-~~G~KMSKS~GN~I~ 312 (511)
T Consensus 151 ~~~vpvG~DQ~~hi-------el~Rdia~r~n~~~~-~~l~~pll~g~dG~KMSKS~~N~i~ 204 (268)
T cd00805 151 VDIQLGGSDQRGNI-------TLGRDLIRRLGYKKV-VGLTTPLLTGLDGGKMSKSEGNAIW 204 (268)
T ss_pred CCCEECCHHHHHHH-------HHHHHHHHHHCCCCC-EEEEECEEECCCCCCCCCCCCCCCC
T ss_conf 77146060089999-------999999998289761-4553110008998744678999501