HHsearch alignment for GI: 255764461 and conserved domain: cd07375
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains. This domain is found in a variety of class Ia aminoacyl tRNA synthetases, C-terminal to the catalytic core domain. It recognizes and specifically binds to the anticodon of the tRNA. Aminoacyl tRNA synthetases catalyze the transfer of cognate amino acids to the 3'-end of their tRNAs by specifically recognizing cognate from non-cognate amino acids. Members include valyl-, leucyl-, isoleucyl-, cysteinyl-, arginyl-, and methionyl-tRNA synthethases. This superfamily also includes a domain from MshC, an enzyme in the mycothiol biosynthetic pathway.
Probab=99.20 E-value=1.8e-10 Score=96.41 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=80.2
Q ss_pred HHHHHHHHCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32110221021345565312332103--4555895565667899999999998775035899999999999999788654
Q gi|255764461|r 353 DLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430 (511)
Q Consensus 353 ~L~~~lgN~~~R~~~f~~k~~~g~ip--~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i~~l~~~~N~yi~~ 430 (511)
T Consensus 9 ~F~nKLWN-a~---rF~~~~~~~~~~~~~~~~l~~~DrWIls~l~~~i~~v~~~~e~y~f~~a~~~l~~F~w~~dwYie~ 84 (117)
T cd07375 9 AFLNRLYR-LL---SFFRKALGGTQPKWDNELLEEADRELLARLQEFIKRTTNALEALDPTTAVQELFKFTNELNWYLDE 84 (117)
T ss_pred HHHHHHHH-HH---HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99989999-99---999856887888656322776279999999899999999999278999999999999936999999
Q ss_pred HCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 187012169999999999999999999999854322
Q gi|255764461|r 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466 (511)
Q Consensus 431 ~~PW~l~k~d~~~~~~vl~~~l~~l~~l~ilL~Pi~ 466 (511)
T Consensus 85 ~K~r-~~~e~~--~~~~~~~L~~vl~~~lkLlhPFt 117 (117)
T cd07375 85 LKPA-LQTEEL--REAVLAVLRAALVVLTKLLAPFT 117 (117)
T ss_pred HHHH-HCCCHH--HHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 6563-048275--79999999999999999819999