HHsearch alignment for GI: 255764461 and conserved domain: cd07962
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases. This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Probab=99.65 E-value=2e-15 Score=133.16 Aligned_cols=130 Identities=18% Similarity=0.334 Sum_probs=100.8
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 1122211100133211022102134556531233210---3455589556566789999999999877503589999999
Q gi|255764461|r 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417 (511)
Q Consensus 341 Fs~~~~~~~~n~~L~~~lgN~~~R~~~f~~k~~~g~i---p~~~~~~~~D~~ll~~l~~~~~~v~~a~e~~~~~~Al~~i 417 (511)
T Consensus 1 ~~e~~i~~~--~rf~nKlwN~----~rf~~~~~~~~~~~~~~~~~~~~~Dkwil~~l~~~~~~i~~~~~~~~f~~a~~~l 74 (135)
T cd07962 1 FDEKRVEGG--RNFCNKLWNA----ARFVLMNLEDDDEPEEDPESLSLADRWILSRLNKTVEEVTEALENYRFSEAATAL 74 (135)
T ss_pred CCHHHHHHH--HHHHHHHHHH----HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 989998999--9999999999----9999875453687546610077999999999999999999999865899999999
Q ss_pred HHHH--HHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 9999--99978865418701216999999999999999999999985432248999999984
Q gi|255764461|r 418 ISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477 (511)
Q Consensus 418 ~~l~--~~~N~yi~~~~PW~l~k~d~~~~~~vl~~~l~~l~~l~ilL~Pi~P~~ae~i~~~L 477 (511)
T Consensus 75 ~~F~~~~ls~~Yie~~K~-rl~~~~~~~~~~~~~~l~~~l~~~l~llaP~~PfitEeiw~~l 135 (135)
T cd07962 75 YEFFWNDFCDWYLELVKP-RLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135 (135)
T ss_pred HHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999899998999999799-8729978999999999999999999999878799999998439