HHsearch results for GI: 255764462 and protein with PDBid: 3l4b_C

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.47  E-value=0.0055  Score=37.78  Aligned_cols=72  Identities=14%  Similarity=0.177  Sum_probs=52.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
Q ss_conf             06999779868899999999679849999827578227578756789889999985997997024344200234210457
Q gi|255764462|r    3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNAD   82 (310)
Q Consensus         3 mkI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~~~~~~~~~l~~~~~D   82 (310)
                      |||+++|...++..+.+.|.+.+++++.|=..++             .+++++.+++.++++-+-.+.+.+++..-.++|
T Consensus         1 m~iiI~G~g~~g~~la~~L~~~g~~vvvid~d~~-------------~~~~~~~~~~~~~i~gD~~~~~~L~~a~i~~a~   67 (218)
T 3l4b_C            1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE-------------LCEEFAKKLKATIIHGDGSHKEILRDAEVSKND   67 (218)
T ss_dssp             CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH-------------HHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH-------------HHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCC
T ss_conf             9899999889999999999978998999999999-------------999999852630785454326888766404665


Q ss_pred             CEEEE
Q ss_conf             31320
Q gi|255764462|r   83 VAVVV   87 (310)
Q Consensus        83 ~~v~~   87 (310)
                      .++++
T Consensus        68 ~~ia~   72 (218)
T 3l4b_C           68 VVVIL   72 (218)
T ss_dssp             EEEEC
T ss_pred             EEEEC
T ss_conf             47641