HHsearch results for GI: 255764462 and protein with PDBid: 3l4b_C
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.47 E-value=0.0055 Score=37.78 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=52.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
Q ss_conf 06999779868899999999679849999827578227578756789889999985997997024344200234210457
Q gi|255764462|r 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNAD 82 (310)
Q Consensus 3 mkI~f~G~~~~~~~~l~~l~~~~~~i~~vvt~~d~~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~~~~~~~~~l~~~~~D 82 (310)
|||+++|...++..+.+.|.+.+++++.|=..++ .+++++.+++.++++-+-.+.+.+++..-.++|
T Consensus 1 m~iiI~G~g~~g~~la~~L~~~g~~vvvid~d~~-------------~~~~~~~~~~~~~i~gD~~~~~~L~~a~i~~a~ 67 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE-------------LCEEFAKKLKATIIHGDGSHKEILRDAEVSKND 67 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH-------------HHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH-------------HHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCC
T ss_conf 9899999889999999999978998999999999-------------999999852630785454326888766404665
Q ss_pred CEEEE
Q ss_conf 31320
Q gi|255764462|r 83 VAVVV 87 (310)
Q Consensus 83 ~~v~~ 87 (310)
.++++
T Consensus 68 ~~ia~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEC
T ss_conf 47641