RPSBLAST alignment for GI: 255764462 and conserved domain: TIGR00460
>gnl|CDD|161888 TIGR00460, fmt, methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met. Length = 313
Score = 231 bits (590), Expect = 2e-61
Identities = 111/306 (36%), Positives = 163/306 (53%), Gaps = 13/306 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VF GT F++ L+ L + +V V TQP +PAGR G K V A+E +P
Sbjct: 1 LRIVFFGTPTFSLPVLEELREDNFEVVGVVTQPDKPAGR-GKKLTPPPVKVLAEEKGIPV 59
Query: 63 LVPTKL-GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K EE DV VVV++G ++P+ L+ G N H SLLPRWRG AP
Sbjct: 60 FQPEKQRQLEELPLVRELKPDVIVVVSFGKILPKEFLDLFPYGCINVHPSLLPRWRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+ GD +TG+ IM+M +D G + PI N+ L +LS L A ++E
Sbjct: 120 IQRAILNGDKKTGVTIMQMVPKMDAGDILKQETFPIEEEDNSGTLSDKLSELGAQLLIET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L + PQ TYA KISK + R+++ +SAE + N IRAL+P+P AWL
Sbjct: 180 LKELPEGKNKPEPQDAEEATYAPKISKEQERIDWNQSAEELLNKIRALNPWPTAWLT--- 236
Query: 242 GNKHERIKLLESQLVEGE---GKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDI 294
+ + IK+ ++++++ KPGE++ N G + ++ LQ G +V+
Sbjct: 237 -FEGKNIKIHKAKVIDLSTYKAKPGEIVYHNKKGILVACGKDGILLLLSLQPPGKKVMRA 295
Query: 295 GDFLLG 300
DF G
Sbjct: 296 EDFYNG 301