HHsearch alignment for GI: 255764463 and conserved domain: TIGR03551
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=96.17 E-value=0.024 Score=37.03 Aligned_cols=221 Identities=18% Similarity=0.195 Sum_probs=112.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 88878632889999999999998889367633025633455445421576537999999999730144798613327100
Q gi|255764463|r 57 NSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 57 ~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
T Consensus 62 p~~~~ay~lt~eei~~~~~~a~~~G~~Ei~~~gG~~Pel~~----------~~y~e~~r~ik~~~p~~~i~a---~s~~E 128 (343)
T TIGR03551 62 KGDADAYLLSLEEIAERAAEAWKAGATEVCIQGGIHPDLDG----------DFYLDILRAVKEEVPGMHIHA---FSPME 128 (343)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH----------HHHHHHHHHHHHHCCCCEEEE---CCHHH
T ss_conf 99986600799999999999997699689982586878888----------899999999987488301022---78999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHCCCC--------EEECCCCC-CCHHHHHHHHHHHCCCCCCCEECHHHH
Q ss_conf 1143100136544628999999999999-9962897--------35246676-779999999998778857730033666
Q gi|255764463|r 137 IHGHDGILCDGEIVNDETIELISHAAVI-QADAGAD--------IIAPSEMM-DGRVQEIRKKLDSHGHINVGIMPYVAK 206 (337)
Q Consensus 137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~-~A~AGaD--------ivAPSdMM-DGrV~aIR~~Ld~~g~~~~~ImsYsaK 206 (337)
T Consensus 129 i~~---~a~~~g~~~~e~l~~Lk~AGl~s~pg~~aEil~~~vr~~i~P~K~~~~~wl~~~~~Ah~lGi~ttatml----- 200 (343)
T TIGR03551 129 VYY---GARNSGLSVEEALKRLKEAGLDSMPGTAAEILDDEVRKVICPDKLSTAEWIEIIKTAHKLGIPTTATIM----- 200 (343)
T ss_pred HHH---HHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE-----
T ss_conf 999---998659999999999997587767886513214012414696989999999999999985997202234-----
Q ss_pred HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC----------------CEEEECCC---HHHHH
Q ss_conf 435430101675310244677774431572114788988887664089----------------87995531---14589
Q gi|255764463|r 207 FNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESA----------------DMLLVKPG---LPYLD 267 (337)
Q Consensus 207 faS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGA----------------D~lMVKPa---~~yLD 267 (337)
T Consensus 201 -----~G--------------~gEt~e-erv~hL~~lR~lqd~-tggf~~fIp~~f~p~~t~l~~~~~~~~~~~~~e~l~ 259 (343)
T TIGR03551 201 -----YG--------------HVETPE-HWVDHLLILREIQEE-TGGFTEFVPLPFVHYNAPLYLKGMARPGPTGREDLK 259 (343)
T ss_pred -----EC--------------CCCCHH-HHHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHH
T ss_conf -----27--------------889999-999999999986201-388269981365667880444156678985799999
Q ss_pred HHHHHHHHC-C-CC-EEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 999999624-9-98-99993461899999999888978899999999999772699
Q gi|255764463|r 268 VCFRIKEKF-G-LP-TFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCD 320 (337)
Q Consensus 268 ii~~~k~~~-~-~P-~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd 320 (337)
T Consensus 260 ~iAvaRl~l~~~i~~Iqa~w~~lg~~~~q~~L~~GanD~gGt~~~e~-i~~~ag~~ 314 (343)
T TIGR03551 260 VHAIARILLHGLIDNIQASWVKLGKKLAQVALRCGANDLGGTLMEES-ISRAAGAS 314 (343)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC-CCHHHCCC
T ss_conf 99999997047765422266255989999999579846766667775-63621579