HHsearch alignment of GI: 255764463 and MMDB domain: 3fk4_A_122-414

>3fk4_A (A:122-414) Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=95.73  E-value=0.051  Score=34.45  Aligned_cols=137  Identities=24%  Similarity=0.256  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf             9999999999999962897352--------46676779999999998778857730033666435430101675310244
Q gi|255764463|r  153 ETIELISHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL  224 (337)
Q Consensus       153 ~Tl~~L~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~  224 (337)
                      -|-+.+++++-.++..|+|+|-        |-.=++-||.+..+++++                             +-.
T Consensus        32 lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~ai~~-----------------------------a~~   82 (293)
T 3fk4_A           32 RNIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQS-----------------------------VYE   82 (293)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHH
T ss_conf             986788999999997078863476556797757488899999999999-----------------------------999


Q ss_pred             CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEE-ECCHHHHHHHHHHHCCC
Q ss_conf             677774431572114-788988887664089879955311458999999962--49989999-34618999999998889
Q gi|255764463|r  225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK--FGLPTFAY-QVSGEYAMIKAASLQGW  300 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~--~~~P~~aY-qVSGEYami~~a~~~g~  300 (337)
                      -.|.|+-|-.|.... .|-++.+..=.++|+..+||-|...=++.++.+++.  +++|+.+= ..+|-|.-   .-..| 
T Consensus        83 eTG~~~lYa~NiT~~~~em~~ra~~a~~~G~~~~mi~~~~~G~~al~~La~~~~~~lpIhaHra~~ga~~r---~~~~G-  158 (293)
T 3fk4_A           83 TYGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSA---SKLYG-  158 (293)
T ss_dssp             HHCCCCEEEEECCSCGGGHHHHHHHHHHHTCSEEEECHHHHCHHHHHHHHHCTTSCSCEEECCTTTHHHHS---CSSSS-
T ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCEEECC---CCCCC-
T ss_conf             85986546634178889999999999985997899966645099999998567889637851466512314---88776-


Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             7889999999999977269999820
Q gi|255764463|r  301 INKNDAMMESLLAFKRAGCDGIFTY  325 (337)
Q Consensus       301 ~d~~~~~~E~l~~~kRAGAd~IitY  325 (337)
                      ++.. .++-  .-.+-||||.+++-
T Consensus       159 i~~~-~vl~--kl~RLaGaD~i~~~  180 (293)
T 3fk4_A          159 VSSP-LLLG--KLLRYAGADFSLFP  180 (293)
T ss_dssp             BCHH-HHHT--HHHHHHTCSEEEEE
T ss_pred             CCHH-HHHH--HHHHHHCCCCCCCC
T ss_conf             3449-9999--99998188844124