HHsearch alignment of GI: 255764463 and MMDB domain: 3fk4_A_122-414
>3fk4_A (A:122-414) Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=95.73 E-value=0.051 Score=34.45 Aligned_cols=137 Identities=24% Similarity=0.256 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf 9999999999999962897352--------46676779999999998778857730033666435430101675310244
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL 224 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~ 224 (337)
-|-+.+++++-.++..|+|+|- |-.=++-||.+..+++++ +-.
T Consensus 32 lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~ai~~-----------------------------a~~ 82 (293)
T 3fk4_A 32 RNIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQS-----------------------------VYE 82 (293)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHH
T ss_conf 986788999999997078863476556797757488899999999999-----------------------------999
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEE-ECCHHHHHHHHHHHCCC
Q ss_conf 677774431572114-788988887664089879955311458999999962--49989999-34618999999998889
Q gi|255764463|r 225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK--FGLPTFAY-QVSGEYAMIKAASLQGW 300 (337)
Q Consensus 225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~--~~~P~~aY-qVSGEYami~~a~~~g~ 300 (337)
-.|.|+-|-.|.... .|-++.+..=.++|+..+||-|...=++.++.+++. +++|+.+= ..+|-|.- .-..|
T Consensus 83 eTG~~~lYa~NiT~~~~em~~ra~~a~~~G~~~~mi~~~~~G~~al~~La~~~~~~lpIhaHra~~ga~~r---~~~~G- 158 (293)
T 3fk4_A 83 TYGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSA---SKLYG- 158 (293)
T ss_dssp HHCCCCEEEEECCSCGGGHHHHHHHHHHHTCSEEEECHHHHCHHHHHHHHHCTTSCSCEEECCTTTHHHHS---CSSSS-
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCEEECC---CCCCC-
T ss_conf 85986546634178889999999999985997899966645099999998567889637851466512314---88776-
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 7889999999999977269999820
Q gi|255764463|r 301 INKNDAMMESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 301 ~d~~~~~~E~l~~~kRAGAd~IitY 325 (337)
++.. .++- .-.+-||||.+++-
T Consensus 159 i~~~-~vl~--kl~RLaGaD~i~~~ 180 (293)
T 3fk4_A 159 VSSP-LLLG--KLLRYAGADFSLFP 180 (293)
T ss_dssp BCHH-HHHT--HHHHHHTCSEEEEE
T ss_pred CCHH-HHHH--HHHHHHCCCCCCCC
T ss_conf 3449-9999--99998188844124