HHsearch results for GI: 255764463 and protein with PDBid: 1lt8_A
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=92.43 E-value=0.43 Score=27.14 Aligned_cols=214 Identities=11% Similarity=0.067 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHCCCCEEEE--EECCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHC--CCEEEECCCCCHHHCCCC
Q ss_conf 99999999999888936763--3025633455445421576---5379999999997301--447986133271001143
Q gi|255764463|r 68 DVAVEKIKQVADLGIPAIAI--FPNIPMDLRNNTGSHIIDP---DNLINEGICAIKKNIP--NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 68 d~L~~eie~~~~lGI~av~L--Fp~I~~~~Kd~~GseA~n~---dglv~rAIr~IK~~fp--dl~vi~DVcLc~YT~hGH 140 (337)
|.+.+.-+.-++.|-.-|.- |...+..+++ .|.+.... ..+...+.+..|+.-+ +..|..++ .|+....
T Consensus 54 e~V~~iH~~Yi~AGAdII~TNTf~a~~~~L~~-~g~~~~e~~~~~~~~~aa~~~ar~a~~~~~~~vaGsi--gp~~~~~- 129 (406)
T 1lt8_A 54 EAVRQLHREFLRAGSNVMQTFTFYASEDKLEN-RGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGV--SQTPSYL- 129 (406)
T ss_dssp HHHHHHHHHHHHTTCSEEECSCTTCSSCC--------------CHHHHHHHHHHHHHHHTTTTCEEEEEE--CCCHHHH-
T ss_pred HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC--CCCCCCC-
T ss_conf 99999999999975999995777146999997-1436589999999999999999874335684343266--7664334-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEE-CHHHHHHHHHHCCHHHHH
Q ss_conf 1001365446289999999999999962897352466767799999999987788577300-336664354301016753
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIM-PYVAKFNSSFYGPYRDAI 219 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~Im-sYsaKfaS~fYgPFRdA~ 219 (337)
+...-++-.+...+|+..+.++|+|++.---|.| +..++.+++...-.+.+++ |.+
T Consensus 130 ------~~~~~~e~~~~~~eqi~~l~~~gvD~il~ETm~~--~~Ea~aa~~a~~~~~~Pv~vs~t--------------- 186 (406)
T 1lt8_A 130 ------SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEH--VEEAVWAVETLIASGKPVAATMA--------------- 186 (406)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSC--HHHHHHHHHHHGGGTSCEEEEEC---------------
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH--HHHHHHHHHHHHCCCCCEEEEEE---------------
T ss_conf ------6899899999999999999835887000467767--89999999997614885689978---------------
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC---HHHHHHHHHHHHH-----CCCCEEEEECCHHHHH
Q ss_conf 1024467777443157211478898888766408987995531---1458999999962-----4998999934618999
Q gi|255764463|r 220 STRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPG---LPYLDVCFRIKEK-----FGLPTFAYQVSGEYAM 291 (337)
Q Consensus 220 ~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa---~~yLDii~~~k~~-----~~~P~~aYqVSGEYam 291 (337)
+..+.+ +.-....|+..+. .+.|+|.+.+-=+ -..+..+..+++. ...|+.+|-.++.|.
T Consensus 187 -----~~~~g~---l~~g~~~e~~~~~---~~~~~~~vGiNC~~gp~~~~~~i~~l~~~~~~~~~~~~~~~~p~~~~~p- 254 (406)
T 1lt8_A 187 -----IGPEGD---LHGVPPGEAAVRL---VKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTP- 254 (406)
T ss_dssp -----CBTTBC---TTCCCHHHHHHHH---HTTTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCT-
T ss_pred -----ECCCCC---CCCCCHHHHHHHH---HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC-
T ss_conf -----757987---3898869999998---7327787986247888999999999998776524666433036612488-
Q ss_pred HHHHHHCCCCC-------------HHHHHHHHHHHHHHHCCCEE
Q ss_conf 99999888978-------------89999999999977269999
Q gi|255764463|r 292 IKAASLQGWIN-------------KNDAMMESLLAFKRAGCDGI 322 (337)
Q Consensus 292 i~~a~~~g~~d-------------~~~~~~E~l~~~kRAGAd~I 322 (337)
.+...||.+ ...-+-|....+...|+++|
T Consensus 255 --na~~~~~~~~p~~~~~~~~~~~~~~~~a~~a~~~~~~Ga~II 296 (406)
T 1lt8_A 255 --DANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI 296 (406)
T ss_dssp --TCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEE
T ss_pred --CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf --887767578986657766442589999999999998199975