HHsearch results for GI: 255764463 and protein with PDBid: 1ykw_A

>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=96.65  E-value=0.012  Score=37.63  Aligned_cols=158  Identities=15%  Similarity=0.177  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEE--------CCCCCC
Q ss_conf             999999997301447986133271001143100136--5446289999999999999962897352--------466767
Q gi|255764463|r  111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIA--------PSEMMD  180 (337)
Q Consensus       111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivA--------PSdMMD  180 (337)
                      ...+|++-..+.--++.+              |++-  |     -|-+.|++++..++..|+|+|-        |-.=+.
T Consensus       152 i~G~R~~lgv~~RPL~~~--------------iiKPk~G-----Lsp~~~a~~~~~~~~GGvDfIKDDE~l~~~~~~p~~  212 (435)
T 1ykw_A          152 IEGLRDILNAHGRPIFFG--------------VVKPNIG-----LSPGEFAEIAYQSWLGGLDIAKDDEMLADVTWSSIE  212 (435)
T ss_dssp             HHHHHHHHTCCSSCEEEE--------------ECSSCSS-----CCHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHH
T ss_pred             HHHHHHHHCCCCCCEECC--------------CCCCCCC-----CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHH
T ss_conf             588999848899831314--------------6788767-----887898999999983487700376445797757599


Q ss_pred             CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEE
Q ss_conf             79999999998778857730033666435430101675310244677774431572114-78898888766408987995
Q gi|255764463|r  181 GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANV-QEAIREASIDIQESADMLLV  259 (337)
Q Consensus       181 GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMV  259 (337)
                      -||.++.+++++.                             ..-.|.++-|-.+.... .|-++.+..=.+.|++.+||
T Consensus       213 eRv~~~~~a~~~a-----------------------------~~~TG~~~lya~NiT~~~~em~~ra~~~~~~G~~~vmv  263 (435)
T 1ykw_A          213 ERAAHLGKARRKA-----------------------------EAETGEPKIYLANITDEVDSLMEKHDVAVRNGANALLI  263 (435)
T ss_dssp             HHHHHHHHHHHHH-----------------------------HHHHSSCCEEEEECCCCGGGHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHHHHH-----------------------------HHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             9999999999999-----------------------------99759755897215799999999999999819978999


Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             53114589999999624998999-934618999999998889788999999999997726999982
Q gi|255764463|r  260 KPGLPYLDVCFRIKEKFGLPTFA-YQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       260 KPa~~yLDii~~~k~~~~~P~~a-YqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      -|...=++.++.+++.+++|+.+ ++.+|-|+   -....|+ +..  ++  -.-.+-||||.|++
T Consensus       264 ~~~~~G~~a~~~l~~~~~lpi~aH~a~~g~~~---r~~~~Gi-s~~--vl--~kL~RLaGaD~i~~  321 (435)
T 1ykw_A          264 NALPVGLSAVRMLSNYTQVPLIGHFPFIASFS---RMEKYGI-HSK--VM--TKLQRLAGLDAVIM  321 (435)
T ss_dssp             EHHHHCHHHHHHHHHHCSSCEEEECTTTHHHH---CSTTSEE-CHH--HH--HHHHHHHTCSEEEE
T ss_pred             ECCCCCHHHHHHHHHHCCCCHHCCCCCCCCCC---CCCCCCC-CHH--HH--HHHHHHCCCCCCCC
T ss_conf             46754279999998743741101313224434---6767852-599--99--99999829780345