HHsearch results for GI: 255764463 and protein with PDBid: 1ykw_A
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=96.65 E-value=0.012 Score=37.63 Aligned_cols=158 Identities=15% Similarity=0.177 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEE--------CCCCCC
Q ss_conf 999999997301447986133271001143100136--5446289999999999999962897352--------466767
Q gi|255764463|r 111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIA--------PSEMMD 180 (337)
Q Consensus 111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivA--------PSdMMD 180 (337)
...+|++-..+.--++.+ |++- | -|-+.|++++..++..|+|+|- |-.=+.
T Consensus 152 i~G~R~~lgv~~RPL~~~--------------iiKPk~G-----Lsp~~~a~~~~~~~~GGvDfIKDDE~l~~~~~~p~~ 212 (435)
T 1ykw_A 152 IEGLRDILNAHGRPIFFG--------------VVKPNIG-----LSPGEFAEIAYQSWLGGLDIAKDDEMLADVTWSSIE 212 (435)
T ss_dssp HHHHHHHHTCCSSCEEEE--------------ECSSCSS-----CCHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHH
T ss_pred HHHHHHHHCCCCCCEECC--------------CCCCCCC-----CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHH
T ss_conf 588999848899831314--------------6788767-----887898999999983487700376445797757599
Q ss_pred CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEE
Q ss_conf 79999999998778857730033666435430101675310244677774431572114-78898888766408987995
Q gi|255764463|r 181 GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANV-QEAIREASIDIQESADMLLV 259 (337)
Q Consensus 181 GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMV 259 (337)
-||.++.+++++. ..-.|.++-|-.+.... .|-++.+..=.+.|++.+||
T Consensus 213 eRv~~~~~a~~~a-----------------------------~~~TG~~~lya~NiT~~~~em~~ra~~~~~~G~~~vmv 263 (435)
T 1ykw_A 213 ERAAHLGKARRKA-----------------------------EAETGEPKIYLANITDEVDSLMEKHDVAVRNGANALLI 263 (435)
T ss_dssp HHHHHHHHHHHHH-----------------------------HHHHSSCCEEEEECCCCGGGHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHH-----------------------------HHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9999999999999-----------------------------99759755897215799999999999999819978999
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 53114589999999624998999-934618999999998889788999999999997726999982
Q gi|255764463|r 260 KPGLPYLDVCFRIKEKFGLPTFA-YQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 260 KPa~~yLDii~~~k~~~~~P~~a-YqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
-|...=++.++.+++.+++|+.+ ++.+|-|+ -....|+ +.. ++ -.-.+-||||.|++
T Consensus 264 ~~~~~G~~a~~~l~~~~~lpi~aH~a~~g~~~---r~~~~Gi-s~~--vl--~kL~RLaGaD~i~~ 321 (435)
T 1ykw_A 264 NALPVGLSAVRMLSNYTQVPLIGHFPFIASFS---RMEKYGI-HSK--VM--TKLQRLAGLDAVIM 321 (435)
T ss_dssp EHHHHCHHHHHHHHHHCSSCEEEECTTTHHHH---CSTTSEE-CHH--HH--HHHHHHHTCSEEEE
T ss_pred ECCCCCHHHHHHHHHHCCCCHHCCCCCCCCCC---CCCCCCC-CHH--HH--HHHHHHCCCCCCCC
T ss_conf 46754279999998743741101313224434---6767852-599--99--99999829780345