HHsearch results for GI: 255764463 and protein with PDBid: 3fk4_A
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=94.06 E-value=0.27 Score=28.50 Aligned_cols=139 Identities=19% Similarity=0.149 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHH-------HHHCCCC
Q ss_conf 899999999999999628973524667677999999999877885773003366643543010167-------5310244
Q gi|255764463|r 152 DETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRD-------AISTRDL 224 (337)
Q Consensus 152 D~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRd-------A~~S~p~ 224 (337)
-.|-+.+++++..++..|+|+|-=- ++..|- -|-||+| |++.+-.
T Consensus 152 Glsp~~~a~~~~e~~~GGvDfIKDD----------------E~la~~------------~~~p~~eRv~~v~~ai~~a~~ 203 (414)
T 3fk4_A 152 GRNIGYLKTQLRDQAIGGVDIVKDD----------------EILFEN------------ALTPLTKRIVSGKEVLQSVYE 203 (414)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEECC----------------TTCCSC------------SSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCC----------------CCCCCC------------CCCCHHHHHHHHHHHHHHHHH
T ss_conf 8986688999999997078863476----------------556797------------667488899999999999999
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHCCCC
Q ss_conf 677774431572114-7889888876640898799553114589999999624--9989999346189999999988897
Q gi|255764463|r 225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFAYQVSGEYAMIKAASLQGWI 301 (337)
Q Consensus 225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~aYqVSGEYami~~a~~~g~~ 301 (337)
-.|-|+-|-.+.... .|-++.+..=.+.|++.+||-|...-++.++.+++.. ++|+. +|-.|--++-. .-..|+
T Consensus 204 ~TG~k~~Ya~NiT~~~~em~~ra~~a~~~G~~~vmi~~~~~G~~~~~~l~~~~~~~lpI~-aHra~~g~~~r-~~~~Gi- 280 (414)
T 3fk4_A 204 TYGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIM-AHPAVSGAYSA-SKLYGV- 280 (414)
T ss_dssp HHCCCCEEEEECCSCGGGHHHHHHHHHHHTCSEEEECHHHHCHHHHHHHHHCTTSCSCEE-ECCTTTHHHHS-CSSSSB-
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEE-ECCCCCCEECC-CCCCCC-
T ss_conf 868965477552799899999999999859978999665350999999985678785378-51476501314-887763-
Q ss_pred CHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 88999999999997726999982
Q gi|255764463|r 302 NKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 302 d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
+.. +++- .-.+-||||.++.
T Consensus 281 ~~~-~~~~--kl~RLaGaD~~~~ 300 (414)
T 3fk4_A 281 SSP-LLLG--KLLRYAGADFSLF 300 (414)
T ss_dssp CHH-HHHT--HHHHHHTCSEEEE
T ss_pred CHH-HHHH--HHHHHCCCCCCCC
T ss_conf 439-9999--9999717884412