HHSEARCH alignment of GI: 255764463 and SCOP domain: d1gzga_

Alignment
>d1gzga_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=0  Score=1119.34  Aligned_cols=327  Identities=48%  Similarity=0.856  Sum_probs=321.4

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             55788858563128988999863477888773311666758988110488878632889999999999998889367633
Q gi|255764463|r    9 HKICCHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus         9 ~~~~p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      ++.||+.||||||+++|+|+||+||+|+++|||||+||+||++.++||+||||++|||+|.|++++++++++||++|+||
T Consensus         1 n~~fP~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~~~~I~SMPGi~R~Sid~l~~~ie~~~~lGI~av~LF   80 (329)
T d1gzga_           1 NRAYPYTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALF   80 (329)
T ss_dssp             CCCTTTCCTHHHHSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEECTTSTTCEEEEHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             99999988665689878999984078778992653599538998423689998426689999999988875386469998


Q ss_pred             ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             025633455445421576537999999999730144798613327100114310013-6544628999999999999996
Q gi|255764463|r   89 PNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQAD  167 (337)
Q Consensus        89 p~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~  167 (337)
                      |++++++||+.|++|||+||++|||||+||+.||||+|||||||||||+||||||++ +|.||||+||++|+|||++||+
T Consensus        81 pvi~~~~Kd~~gseA~n~d~lv~rAIr~IK~~~p~l~vi~DVcLc~YT~hGHcGil~~~g~idND~Tl~~L~k~Al~~A~  160 (329)
T d1gzga_          81 PVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQNGILDDDGYVLNDVSIDVLVRQALSHAE  160 (329)
T ss_dssp             ECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             66413225677644468613899999999986271799851002331453268753478871728999999999999997


Q ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             2897352466767799999999987788577300336664354301016753102446-777744315721147889888
Q gi|255764463|r  168 AGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL-KGDKKTYYLDPANVQEAIREA  246 (337)
Q Consensus       168 AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~-~gdr~sYQmd~~n~~eA~~e~  246 (337)
                      ||||+|||||||||||++||++||++||++|+|||||+||+|+||||||||++|+|+| +|||+||||||+|++||+||+
T Consensus       161 AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~v~ImsYsaKfaS~fYGPFRda~~S~p~~~~gdr~sYQmd~~n~~eA~~e~  240 (329)
T d1gzga_         161 AGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEV  240 (329)
T ss_dssp             HTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHHHTCHHHHTTCCCTTTSBCTTCSHHHHHHH
T ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             46885631455234899999999976986763101566623343145899862412048997231002788889999999


Q ss_pred             HHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf             87664089879955311458999999962499899993461899999999888978899999999999772699998201
Q gi|255764463|r  247 SIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYF  326 (337)
Q Consensus       247 ~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~  326 (337)
                      .+|++||||||||||||||||||+++|++|++|++||||||||||||+|+++||+|+ ++++|+|++|||||||+|||||
T Consensus       241 ~~D~~EGAD~lMVKPa~~yLDii~~~~~~~~~Pv~aYqVSGEYami~~a~~~g~~~~-~~~~E~l~~~kRAGAd~IitY~  319 (329)
T d1gzga_         241 AADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLAE-SVILESLTAFKRAGADGILTYF  319 (329)
T ss_dssp             HHHHHTTCSEEEEESSGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCT-THHHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHCCCCEEEECC
T ss_conf             998861887477504115658899998736998899968239999999998699635-1899999999864999998703


Q ss_pred             HHHHHHHHHC
Q ss_conf             8999999850
Q gi|255764463|r  327 AMEAARILTH  336 (337)
Q Consensus       327 A~~~a~~L~~  336 (337)
                      |+++|+||+.
T Consensus       320 a~~~a~~L~~  329 (329)
T d1gzga_         320 AKQAAEQLRR  329 (329)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHCC
T ss_conf             9999998659


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
domain: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
species: Pseudomonas aeruginosa [TaxId: 287]