HHsearch alignment for GI: 255764464 and conserved domain: TIGR02571
>TIGR02571 ComEB ComE operon protein 2; InterPro: IPR013404 This is encoded in the ComE operon for "late competence" as characterised in B. subtilis . The presence of a cytidine/deoxycytidine deaminase domain in these proteins means that they may perform this activity..
Probab=99.30 E-value=3.7e-12 Score=93.97 Aligned_cols=101 Identities=28% Similarity=0.385 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCC---------------CCCCCHHHHHHHHHHH
Q ss_conf 9856999999999999887579980899998389099987347354488---------------6425113445666641
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRI 65 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d---------------~t~HAEi~ai~~a~~~ 65 (149)
T Consensus 3 i~W~~yfm~q~~ll~~rstC~-rl~vGativ~d~riiaGGynGs~~G~~hC~~~GC~~~d~hC~rtihaemna~lqCak~ 81 (151)
T TIGR02571 3 IKWDQYFMAQSHLLALRSTCT-RLSVGATIVRDKRIIAGGYNGSVAGEVHCIDEGCYVVDGHCVRTIHAEMNALLQCAKF 81 (151)
T ss_pred CCHHHHHHHHHHHHHHHHHCC-HHEECEEEEECCEEEECCCCCEECCCCEEECCCCEEEECCEEEHHHHHHHHHHHHHHC
T ss_conf 536788888888875420000-0000204542362662364530137723312773786174300367889999988640
Q ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECC
Q ss_conf 488545411688616776889899986088859997117
Q gi|255764464|r 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 (149)
Q Consensus 66 ~~~~~l~~~tlYtTlEPC~MC~~Ai~~agI~rVvyg~~d 104 (149)
T Consensus 82 -G~~-t~~a~~yvt~fPCl~C~k~~~q~Gi~~~~y~~~y 118 (151)
T TIGR02571 82 -GVS-TEEAEIYVTHFPCLQCTKSIIQAGIKKVYYAKDY 118 (151)
T ss_pred -CCC-CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -554-3663489850756789999998667874666632