HHsearch results for GI: 255764464 and protein with PDBid: 1vq2_A

>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=99.96  E-value=5.4e-30  Score=199.83  Aligned_cols=137  Identities=25%  Similarity=0.310  Sum_probs=110.6

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCC------------------------------------
Q ss_conf             56999999999999887579980899998389099987347354------------------------------------
Q gi|255764464|r    3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------------------------------   46 (149)
Q Consensus         3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~------------------------------------   46 (149)
                      +++.||++|+..|+++... ..+||||||++|+||+.|||..-.                                    
T Consensus         2 k~~~~M~~A~~~a~rS~c~-~~~VGAVIV~~~~IIs~G~Ng~P~G~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (193)
T 1vq2_A            2 KASTVLQIAYLVSQESKCC-SWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFGS   80 (193)
T ss_dssp             CHHHHHHHHHHHHTTCCCS-SBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC------------------
T ss_pred             CHHHHHHHHHHHHHHCCCC-CCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCC
T ss_conf             8899999999999758999-998789999899899987489976887645331012111032111222101100001121


Q ss_pred             -----------------CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCE
Q ss_conf             -----------------488642511344566664148854541168861677688989998608885999711798850
Q gi|255764464|r   47 -----------------LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG  109 (149)
Q Consensus        47 -----------------~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~agI~rVvyg~~d~~~g~  109 (149)
                                       ..+++.|||++||.++.+.  ...+.+++||+|+|||+||+.+|+|+||++|||+..+++.. 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~iHAE~~ai~~~~~~--~~~~~~~~lyvt~~PC~~Ca~~i~~~gI~~V~~~~~~~~~~-  157 (193)
T 1vq2_A           81 TDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAEN--GSSIEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNK-  157 (193)
T ss_dssp             --CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHH--TCCCTTCEEEEEECCCHHHHHHHHHHTCCEEEEEECCTTCC-
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--CCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCC-
T ss_conf             100000002332100136788769899999999883--78887743664789659999999997989899962899953-


Q ss_pred             ECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             1741344431689999879928218999999899988409
Q gi|255764464|r  110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                       .....++...+    ++|+ +++++|+.+|++++|.+-|
T Consensus       158 -~~~~~~l~~~g----I~v~-~i~~~~~~~l~~~~~~~~~  191 (193)
T 1vq2_A          158 -PGWDDILRNAG----IEVF-NVPKKNLNKLNWENINEFC  191 (193)
T ss_dssp             -TTTTHHHHHTT----CEEE-ECCGGGCCSSCGGGCCCBC
T ss_pred             -HHHHHHHHHCC----CEEE-ECCHHHHHHHHHHHHHHHH
T ss_conf             -79999999879----9799-5199999999999999985