HHsearch results for GI: 255764464 and protein with PDBid: 2a8n_A
>2a8n_A Cytidine and deoxycytidylate deaminase; RNA editing, RNA binding protein; 1.60A {Agrobacterium tumefaciens} SCOP: c.97.1.2
Probab=100.00 E-value=0 Score=310.93 Aligned_cols=144 Identities=60% Similarity=1.059 Sum_probs=141.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 98569999999999998875799808999983890999873473544886425113445666641488545411688616
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl 80 (149)
|.+|++||++||++|++|.+.|++|||||||++|+||+.|+|++++..|++.|||++||++|++.++++.++++|||+|+
T Consensus 1 m~~~~~fM~~Al~~A~~a~~~g~~PvGavIV~~g~ii~~g~n~~~~~~~~~~HaE~~ai~~a~~~~~~~~l~~~tly~t~ 80 (144)
T 2a8n_A 1 MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVTL 80 (144)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCC
T ss_conf 96069999999999998630699988999998999999842031026886401899999999997188734763332567
Q ss_pred CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH
Q ss_conf 7768898999860888599971179885017413444316899998799282189999998999
Q gi|255764464|r 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 (149)
Q Consensus 81 EPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~f 144 (149)
|||+||++||+|+||+|||||+.||+.|+.++..+++..+.+||+++|++||+++||.+||++|
T Consensus 81 EPC~mC~~ai~~~gI~rVvyg~~d~~~g~~g~~~~~~~~~~~~~~~eV~~Gvl~~E~~~L~~~F 144 (144)
T 2a8n_A 81 EPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSGLAESESAEILRQF 144 (144)
T ss_dssp CCBHHHHHHHHHTTCSEEEEEECCTTTBCSSSTTCGGGSTTCCCCCEEEEC-------------
T ss_pred CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCC
T ss_conf 8987899999996999899997089977556188987604799998899486899999997479