HHsearch results for GI: 255764464 and protein with PDBid: 3g8q_A
>3g8q_A Predicted RNA-binding protein, contains thump domain; cytidine deaminase, ferredoxin-like domain; 2.40A {Methanopyrus kandleri}
Probab=97.12 E-value=0.0014 Score=41.19 Aligned_cols=63 Identities=25% Similarity=0.362 Sum_probs=52.8
Q ss_pred CEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 08999983890999873473544886425113445666641488545411688616776889899986088859997
Q gi|255764464|r 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 (149)
Q Consensus 25 PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~agI~rVvyg 101 (149)
.|-|.+...|+|++... ..|- |||....++ .+..|-.+|+|..||.-|+..+..+|+.-|||-
T Consensus 23 tvtaalleggeivavee-----adde--haerklvrr-------hdvegkvvfvtarpclycarelaeagvagvvyl 85 (278)
T 3g8q_A 23 TVTAALLEGGEIVAVEE-----ADDE--HAERKLVRR-------HDVEGKVVFVTARPCLYCARELAEAGVAGVVYL 85 (278)
T ss_dssp SCEEEEEETTEEEEEEE-----CSSS--CHHHHHHHH-------SCCTTCEEEESSCCCHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHHHCCCEEEEEEC-----CCHH--HHHHHHHHH-------HCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEE
T ss_conf 64698755870898850-----4616--777766765-------056633999976517888999875552058996